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capsid_protein
Euk-VirAdeno-associated_virus_-_8
capsid_protein__YP_077180__Adeno-associated_virus_-_8__202813
Identity
- Accession:
- YP_077180 ↗
- Protein ID:
- capsid_protein
- Kingdom:
- euk
Quality
71.9
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Dependoparvovirus›
adeno-associated_virus_8
TaxID: 202813
Cluster
View cluster (92 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-129
Domain cluster:
rep: capsid_protein_VP1__YP_009508795__Bat_bocavirus_XM30__2259811__D8-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08398.16 best | Phospholip_A2_4 | 115.1 | 2.00e-33 | 83.3% | 100.0% |
D2
high
residues 231-426_614-691
Domain cluster:
rep: VP2__YP_009508801__Miniopterus_schreibersii_bat_bocavirus__1911554__D51-253_470-529
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 287.2 | 3.40e-85 | 71.9% | 41.3% |
| PF00740.24 | VP1_2 | 89.7 | 2.40e-25 | 29.6% | 13.5% |
D3
medium
residues 480-609
Domain cluster:
rep: capsid_protein__YP_077178__Adeno-associated_virus_-_7__202812__D486-584
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00740.24 best | VP1_2 | 81.8 | 5.90e-23 | 100.0% | 27.4% |