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capsid_protein_precursor
Euk-VirBovine_astrovirus_B170_HK
capsid_protein_precursor__YP_009010954__Bovine_astrovirus_B170_HK__1027244
Identity
- Accession:
- YP_009010954 ↗
- Protein ID:
- capsid_protein_precursor
- Kingdom:
- euk
Quality
68.6
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Stellavirales›
Astroviridae›
Mamastrovirus›
Bovine_astrovirus_B170/HK
TaxID: 1027244
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 704-783
Domain cluster:
rep: capsid_protein_precursor__YP_009010945__Bovine_astrovirus_B76_HK__1027248__D694-757
D2
medium
residues 90-275
Domain cluster:
rep: coat_protein__YP_009237527__Lake_Sarah-associated_circular_virus-14_Viruses.__X__D77-111_199-281_337-370
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03115.21 best | Astro_capsid_N | 175.4 | 1.90e-51 | 96.8% | 72.7% |
| PF03014.21 | SP2 | 22.1 | 1.50e-04 | 92.5% | 72.2% |
D3
medium
residues 276-405
Domain cluster:
rep: capsid_protein__NP_056788__Hepeviridae__291484__D322-442
D4
medium
residues 423-451_470-547_579-597_635-661
D5
medium
residues 548-578_598-634