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capsid_triplex_subunit_1
Euk-VirEquid_gammaherpesvirus_2
capsid_triplex_subunit_1__NP_042659__Equid_gammaherpesvirus_2__12657
Identity
- Accession:
- NP_042659 ↗
- Protein ID:
- capsid_triplex_subunit_1
- Kingdom:
- euk
Quality
77.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Percavirus›
Equid_gammaherpesvirus_2
TaxID: 12657
Cluster
View cluster (43 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-50_67-205
Domain cluster:
rep: capsid_assembly_and_DNA_maturation_protein-like_protein__YP_010087431__Vombatid_gammaherpesvirus_1__2052651__D70-204
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 149.4 | 2.00e-43 | 84.5% | 49.0% |
D2
medium
residues 206-338
Domain cluster:
rep: capsid_triplex_subunit_1__YP_004940218__Saimiriine_betaherpesvirus_4__1535247__D166-291
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 151.1 | 6.00e-44 | 100.0% | 50.9% |