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capsid_triplex_subunit_1
Euk-VirEquid_alphaherpesvirus_4
capsid_triplex_subunit_1__NP_045239__Equid_alphaherpesvirus_4__10331
Identity
- Accession:
- NP_045239 ↗
- Protein ID:
- capsid_triplex_subunit_1
- Kingdom:
- euk
Quality
75.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Equid_alphaherpesvirus_4
TaxID: 10331
Cluster
View cluster (32 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 19-29_102-290
Domain cluster:
rep: capsid_assembly_and_DNA_maturation_protein-like_protein__YP_010087431__Vombatid_gammaherpesvirus_1__2052651__D70-204
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 91.2 | 1.10e-25 | 72.0% | 50.9% |
D2
medium
residues 291-372_404-462
Domain cluster:
rep: capsid_triplex_subunit_1__YP_164481__Cercopithecine_alphaherpesvirus_2__10317__D295-353_402-425
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 86.8 | 2.40e-24 | 97.9% | 41.4% |