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capsid_triplex_subunit_1
Euk-VirCercopithecine_alphaherpesvirus_9
capsid_triplex_subunit_1__NP_077435__Cercopithecine_alphaherpesvirus_9__35246
Identity
- Accession:
- NP_077435 ↗
- Protein ID:
- capsid_triplex_subunit_1
- Kingdom:
- euk
Quality
73.3
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Cercopithecine_alphaherpesvirus_9
TaxID: 35246
Cluster
View cluster (32 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 104-302
Domain cluster:
rep: capsid_assembly_and_DNA_maturation_protein-like_protein__YP_010087431__Vombatid_gammaherpesvirus_1__2052651__D70-204
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 89.6 | 3.40e-25 | 92.5% | 53.2% |
D2
medium
residues 303-367_404-467
Domain cluster:
rep: capsid_triplex_subunit_1__YP_004940218__Saimiriine_betaherpesvirus_4__1535247__D166-291
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 70.9 | 1.70e-19 | 98.5% | 40.3% |