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capsid_triplex_subunit_1
Euk-VirPanine_betaherpesvirus_2
capsid_triplex_subunit_1__NP_612689__Panine_betaherpesvirus_2__188763
Identity
- Accession:
- NP_612689 ↗
- Protein ID:
- capsid_triplex_subunit_1
- Kingdom:
- euk
Quality
83.6
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Panine_betaherpesvirus_2
TaxID: 188763
Cluster
View cluster (43 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-164
Domain cluster:
rep: capsid_assembly_and_DNA_maturation_protein-like_protein__YP_010087431__Vombatid_gammaherpesvirus_1__2052651__D70-204
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 93.5 | 2.30e-26 | 94.6% | 46.4% |
D2
medium
residues 165-292
Domain cluster:
rep: capsid_triplex_subunit_1__YP_004940218__Saimiriine_betaherpesvirus_4__1535247__D166-291
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 107.2 | 1.50e-30 | 99.2% | 51.7% |