←Back to structures
capsid_triplex_subunit_1
Euk-VirTestudinid_alphaherpesvirus_3
capsid_triplex_subunit_1__YP_009176899__Testudinid_alphaherpesvirus_3__2560801
Identity
- Accession:
- YP_009176899 ↗
- Protein ID:
- capsid_triplex_subunit_1
- Kingdom:
- euk
Quality
68.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Scutavirus›
Testudinid_alphaherpesvirus_3
TaxID: 2560801
Cluster
View cluster (32 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 87-270
Domain cluster:
rep: capsid_assembly_and_DNA_maturation_protein-like_protein__YP_010087431__Vombatid_gammaherpesvirus_1__2052651__D70-204
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 30.9 | 2.70e-07 | 95.1% | 20.2% |
D2
medium
residues 271-349_393-447
Domain cluster:
rep: capsid_triplex_subunit_1__YP_004940218__Saimiriine_betaherpesvirus_4__1535247__D166-291
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 78.5 | 8.20e-22 | 99.2% | 51.7% |