←Back to structures
capsid_triplex_subunit_1
Euk-VirSpheniscid_alphaherpesvirus_1
capsid_triplex_subunit_1__YP_009342365__Spheniscid_alphaherpesvirus_1__2560777
Identity
- Accession:
- YP_009342365 ↗
- Protein ID:
- capsid_triplex_subunit_1
- Kingdom:
- euk
Quality
75.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Spheniscid_alphaherpesvirus_1
TaxID: 2560777
Cluster
View cluster (32 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 103-295
Domain cluster:
rep: capsid_assembly_and_DNA_maturation_protein-like_protein__YP_010087431__Vombatid_gammaherpesvirus_1__2052651__D70-204
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 82.6 | 4.60e-23 | 74.1% | 40.3% |
D2
medium
residues 296-361_408-466
Domain cluster:
rep: capsid_triplex_subunit_1__YP_164481__Cercopithecine_alphaherpesvirus_2__10317__D295-353_402-425
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03327.20 best | Herpes_VP19C | 88.5 | 7.40e-25 | 99.2% | 43.4% |