capsid_triplex_subunit_2

Euk-Vir

Gallid_alphaherpesvirus_2

capsid_triplex_subunit_2__YP_001033946__Gallid_alphaherpesvirus_2__10390

Identity

77.3 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Gallid_alphaherpesvirus_2

TaxID: 10390

View cluster (76 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-207_293-319

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01802.24 best	Herpes_V23	222.5	1.10e-65	91.5%	68.6%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3havA01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.52	21.0	3.20e-01	79.5%	91.0%
2nvnA00	2.30.31.10	Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A	0.51	26.0	3.56e-01	73.5%	93.3%
2xzlA02	2.40.30.230	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 ›	0.51	18.0	2.94e-01	94.9%	87.3%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4610999	304.7.1.2 ↗	a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9	0.60	18.0	2.84e-01	70.1%	63.0%
3493361	277.1.1.1 ↗	a+b two layers › PX domain › PX domain › PX domain › PX	0.57	22.0	2.98e-01	79.5%	65.0%
5792	295.1.1.6 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818	0.51	26.0	3.54e-01	73.5%	92.6%

D2 medium residues 208-248_267-292

PDB