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capsid_triplex_subunit_2
Euk-VirSaimiriine_betaherpesvirus_4
capsid_triplex_subunit_2__YP_004940248__Saimiriine_betaherpesvirus_4__1535247
Identity
- Accession:
- YP_004940248 ↗
- Protein ID:
- capsid_triplex_subunit_2
- Kingdom:
- euk
Quality
86.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Saimiriine_betaherpesvirus_4
TaxID: 1535247
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-142_282-301
Domain cluster:
rep: capsid_triplex_subunit_2__NP_077456__Cercopithecine_alphaherpesvirus_9__35246__D3-114_290-314
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01802.24 best | Herpes_V23 | 165.9 | 1.90e-48 | 89.3% | 45.6% |
D2
medium
residues 144-186
Domain cluster:
rep: hypothetical_protein_MuHV1_gp079__YP_214087__Murid_betaherpesvirus_1__10366__D138-179
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01802.24 best | Herpes_V23 | 34.7 | 1.80e-08 | 100.0% | 14.2% |
D3
medium
residues 194-279
Domain cluster:
rep: capsid_triplex_subunit_2__YP_073798__Human_betaherpesvirus_7__10372__D193-268
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01802.24 best | Herpes_V23 | 80.5 | 2.00e-22 | 100.0% | 29.0% |