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capsid_triplex_subunit_2
Euk-VirColumbid_alphaherpesvirus_1
capsid_triplex_subunit_2__YP_009352923__Columbid_alphaherpesvirus_1__93386
Identity
- Accession:
- YP_009352923 ↗
- Protein ID:
- capsid_triplex_subunit_2
- Kingdom:
- euk
Quality
77.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Columbid_alphaherpesvirus_1
TaxID: 93386
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-141_300-321
Domain cluster:
rep: capsid_triplex_subunit_2__NP_077456__Cercopithecine_alphaherpesvirus_9__35246__D3-114_290-314
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01802.24 best | Herpes_V23 | 149.7 | 1.60e-43 | 87.8% | 43.6% |
D2
high
residues 211-260_273-294
D3
medium
residues 142-210
Domain cluster:
rep: capsid_triplex_subunit_2__YP_009342388__Spheniscid_alphaherpesvirus_1__2560777__D140-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01802.24 best | Herpes_V23 | 43.2 | 4.60e-11 | 100.0% | 22.3% |