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cell_division_cycle_123_protein
Euk-VirBrazilian_marseillevirus
cell_division_cycle_123_protein__YP_009238963__Brazilian_marseillevirus__1813599
Identity
- Accession:
- YP_009238963 ↗
- Protein ID:
- cell_division_cycle_123_protein
- Kingdom:
- euk
Quality
78.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Brazilian_marseillevirus
TaxID: 1813599
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-61
Domain cluster:
rep: putative_CDC123-like_protein__YP_004347367__Lausannevirus__999883__D14-60
D2
high
residues 66-152
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ethA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.70 | 47.0 | 5.44e-01 | 82.8% | 98.4% |
| 4mamA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.69 | 57.0 | 5.87e-01 | 100.0% | 95.1% |
| 7lgnB01 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.69 | 54.0 | 5.64e-01 | 100.0% | 92.5% |
| 3k5iA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.69 | 52.0 | 5.64e-01 | 96.6% | 100.0% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.67 | 46.0 | 4.71e-01 | 100.0% | 73.5% |
| 3tqtA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.66 | 47.0 | 5.17e-01 | 82.8% | 97.1% |
| 6dgiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.66 | 48.0 | 5.25e-01 | 81.6% | 98.5% |
| 1gsaA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.65 | 45.0 | 5.08e-01 | 80.5% | 96.9% |
| 3lp8A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.65 | 48.0 | 5.19e-01 | 80.5% | 97.1% |
| 4wd3A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.64 | 50.0 | 5.32e-01 | 92.0% | 97.3% |
| 1z2nX03 | 3.30.1490.220 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.64 | 43.0 | 4.03e-01 | 80.5% | 56.6% |
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.60 | 45.0 | 4.37e-01 | 81.6% | 97.0% |
| 1m0sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 34.0 | 3.63e-01 | 95.4% | 69.4% |
| 2gj2A00 | 3.30.70.2070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › VP9 protein domain | 0.56 | 31.0 | 3.23e-01 | 94.3% | 55.7% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.50 | 33.0 | 3.09e-01 | 97.7% | 50.5% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3970872 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.75 | 63.0 | 4.71e-01 | 100.0% | 38.0% |
| 3969881 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.74 | 61.0 | 4.21e-01 | 100.0% | 26.4% |
| None | — | 0.70 | 58.0 | 4.33e-01 | 100.0% | 35.9% | |
| None | — | 0.69 | 56.0 | 4.22e-01 | 100.0% | 35.5% | |
| 136748 | 206.1.3.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp | 0.69 | 57.0 | 4.26e-01 | 100.0% | 37.7% |
| 4664984 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.69 | 58.0 | 4.04e-01 | 100.0% | 27.9% |
| None | — | 0.68 | 59.0 | 4.07e-01 | 100.0% | 28.8% | |
| 4976812 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.68 | 59.0 | 4.20e-01 | 100.0% | 31.1% |
| 3387349 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.68 | 60.0 | 4.48e-01 | 100.0% | 39.1% |
| None | — | 0.68 | 57.0 | 3.46e-01 | 100.0% | 14.1% | |
| 3950507 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.68 | 53.0 | 5.61e-01 | 85.1% | 97.3% |
| 4600459 | 206.1.3.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A | 0.67 | 57.0 | 4.07e-01 | 100.0% | 31.8% |
| None | — | 0.67 | 57.0 | 4.05e-01 | 100.0% | 31.2% | |
| 3203695 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.66 | 56.0 | 3.78e-01 | 100.0% | 24.5% |
| 4520582 | 206.1.3.63 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A, CPSase_L_D2 | 0.66 | 56.0 | 3.93e-01 | 100.0% | 28.8% |
| None | — | 0.66 | 56.0 | 3.78e-01 | 100.0% | 24.5% | |
| 4002926 | 206.1.3.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A | 0.66 | 56.0 | 4.13e-01 | 100.0% | 36.0% |
| 3726371 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.66 | 56.0 | 4.21e-01 | 100.0% | 37.7% |
| 4187720 | 206.1.3.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A | 0.66 | 56.0 | 4.02e-01 | 100.0% | 31.5% |
| None | — | 0.65 | 56.0 | 4.12e-01 | 100.0% | 35.7% | |
| 5011880 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.65 | 57.0 | 4.23e-01 | 100.0% | 38.2% |
| 5061777 | 206.1.3.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A | 0.65 | 55.0 | 4.06e-01 | 100.0% | 34.9% |
| 3173607 | 206.1.3.45 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Biotin_carb_C+CPSase_L_D2 | 0.64 | 56.0 | 3.76e-01 | 100.0% | 25.2% |
| 4983413 | 206.1.3.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_2 | 0.64 | 56.0 | 4.11e-01 | 100.0% | 36.6% |
| 3962998 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.64 | 56.0 | 4.22e-01 | 100.0% | 40.0% |
| 4588934 | 206.1.3.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4 | 0.63 | 54.0 | 3.84e-01 | 100.0% | 29.3% |
| 3962156 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.63 | 55.0 | 3.99e-01 | 100.0% | 34.7% |
| None | — | 0.63 | 55.0 | 4.11e-01 | 100.0% | 38.2% | |
| 4649580 | 206.1.3.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_2 | 0.62 | 56.0 | 4.16e-01 | 100.0% | 40.0% |
| 5041794 | 206.1.3.40 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_YheCD | 0.62 | 53.0 | 3.80e-01 | 100.0% | 31.2% |
| 5053579 | 206.1.3.16 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Ins134_P3_kin | 0.62 | 54.0 | 3.83e-01 | 100.0% | 31.7% |
| 3714880 | 206.1.3.12 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL | 0.60 | 52.0 | 3.46e-01 | 100.0% | 29.9% |
| 3734729 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.60 | 53.0 | 3.81e-01 | 100.0% | 34.7% |
| 2898190 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.57 | 44.0 | 3.68e-01 | 82.8% | 96.0% |
| 3600733 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.54 | 46.0 | 4.04e-01 | 100.0% | 81.4% |
D3
high
residues 158-267
Domain cluster:
rep: SR-VP_2-4_scaffold_141_2548329_prodigal-single.1__X__X__00276__D68-84_169-266