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chaperone_protein_DnaJ

Euk-Vir

Brazilian_marseillevirus

chaperone_protein_DnaJ__YP_009238826__Brazilian_marseillevirus__1813599

Identity

Accession:
YP_009238826 ↗
Protein ID:
chaperone_protein_DnaJ
Kingdom:
euk

Quality

65.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Brazilian_marseillevirus

TaxID: 1813599

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 201-264
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nltA03 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.87 80.0 7.31e-01 100.0% 89.0%
1c3gA01 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.79 65.0 6.12e-01 90.6% 94.9%
2wyqA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.64 44.0 4.14e-01 71.9% 79.2%
3kqxL01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.61 53.0 3.86e-01 100.0% 36.2%
8a57D02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 41.0 2.95e-01 73.4% 77.5%
7y6oA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 48.0 4.46e-01 100.0% 94.4%
2byvE05 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 42.0 3.92e-01 78.1% 83.5%
5ek8A01 2.60.40.3330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 43.0 3.60e-01 87.5% 57.9%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 43.0 3.35e-01 89.1% 37.6%
1ykdB02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.55 45.0 3.41e-01 100.0% 54.0%
2dn7A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.60e-01 87.5% 52.3%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.52 38.0 2.87e-01 79.7% 75.7%
3e0jA01 3.60.21.50 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › 0.52 41.0 2.74e-01 90.6% 94.3%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.52 36.0 3.64e-01 78.1% 89.7%
6xizA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.51 43.0 3.46e-01 100.0% 85.1%
3q48A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.61e-01 87.5% 92.8%
2o8rB02 3.30.1840.10 Alpha Beta › 2-Layer Sandwich › polyphosphate kinase like › Polyphosphate kinase middle domain 0.51 35.0 2.74e-01 73.4% 45.2%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3937672 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.88 82.0 6.56e-01 100.0% 64.3%
3712687 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.87 81.0 6.52e-01 100.0% 62.6%
3601944 67.1.1.0 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain 0.86 80.0 6.53e-01 100.0% 65.5%
3428867 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.83 75.0 6.68e-01 100.0% 88.9%
3368296 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.82 75.0 6.63e-01 100.0% 81.1%
3261495 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.78 69.0 6.32e-01 100.0% 91.8%
4476706 239.4.1.1 ↗ beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.69 48.0 4.24e-01 73.4% 57.9%
3612951 375.3.1.2 ↗ few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-CSL 0.65 52.0 5.00e-01 89.1% 96.0%
3211699 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.60 43.0 3.52e-01 76.6% 71.7%
3949342 3739.1.1.1 ↗ beta sandwiches › TraO N-terminal domain › TraO N-terminal domain › TraO N-terminal domain › CagX 0.56 48.0 3.89e-01 100.0% 72.3%
5003023 1.1.2.16 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD 0.56 44.0 3.69e-01 90.6% 100.0%
1883519 2004.1.1.53 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt 0.54 40.0 2.49e-01 81.2% 46.4%
4960072 239.3.1.1 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin 0.53 40.0 3.26e-01 84.4% 96.2%
5019878 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.51 42.0 3.57e-01 100.0% 88.6%
3189419 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.51 37.0 2.59e-01 84.4% 41.8%
D2 medium residues 1-80
PDB
D3 medium residues 81-195
PDB