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chemokine_vCXCL2

Euk-Vir

Human_betaherpesvirus_5

chemokine_vCXCL2__YP_081570__Human_betaherpesvirus_5__10359

Identity

Accession:
YP_081570 ↗
Protein ID:
chemokine_vCXCL2
Kingdom:
euk

Quality

82.0 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Human_betaherpesvirus_5

TaxID: 10359

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 50-100
PDB
Domain cluster: rep: chemokine_vCXCL7__YP_004936092__Cercopithecine_betaherpesvirus_5__50292__D42-88
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00048.26 best IL8 22.6 1.40e-04 100.0% 53.3%
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1f9qD00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.82 72.0 6.59e-01 100.0% 75.8%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.79 69.0 6.47e-01 100.0% 79.7%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.78 67.0 6.12e-01 100.0% 73.1%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.77 68.0 6.28e-01 100.0% 81.8%
1zxtA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.77 66.0 6.26e-01 100.0% 80.3%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 64.0 5.94e-01 100.0% 74.2%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 62.0 5.63e-01 100.0% 67.1%
1eotA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 65.0 5.80e-01 100.0% 71.6%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.75 62.0 5.58e-01 100.0% 65.8%
3n4eA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.74 52.0 4.09e-01 74.5% 86.5%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 64.0 5.57e-01 100.0% 64.9%
4oijA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 61.0 5.56e-01 100.0% 69.0%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 60.0 5.58e-01 100.0% 74.6%
4e4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.72 50.0 3.64e-01 74.5% 63.1%
6az1E02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.70 43.0 4.34e-01 76.5% 60.8%
4hd5A01 2.60.40.3760 Mainly Beta › Sandwich › Immunoglobulin-like › 0.69 51.0 4.19e-01 80.4% 94.8%
1ha6A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 57.0 5.26e-01 100.0% 71.4%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.69 42.0 4.24e-01 76.5% 60.8%
1t6eX02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.68 48.0 3.27e-01 76.5% 62.8%
5dmxB02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.68 54.0 3.83e-01 88.2% 76.3%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.67 53.0 3.65e-01 86.3% 43.5%
8hmcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 48.0 3.02e-01 80.4% 13.3%
4bzyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 48.0 3.73e-01 78.4% 61.9%
2vqeL00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 47.0 3.58e-01 76.5% 34.7%
5t1dB00 3.10.390.20 Alpha Beta › Roll › SAND domain › Viral glycoprotein L 0.65 56.0 4.58e-01 100.0% 53.5%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 47.0 4.58e-01 80.4% 78.0%
2hdlA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 55.0 4.92e-01 100.0% 77.9%
8dajA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.64 50.0 3.14e-01 86.3% 50.5%
4ipeB02 3.30.230.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.64 44.0 3.17e-01 74.5% 43.6%
2ky8A00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.64 46.0 4.14e-01 76.5% 74.3%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 45.0 3.86e-01 82.4% 44.0%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.43e-01 82.4% 72.7%
7prrB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.62 44.0 3.12e-01 78.4% 100.0%
1jv2B04 4.10.1240.30 Few Secondary Structures › Irregular › Hormone receptor fold › 0.62 49.0 4.28e-01 94.1% 83.7%
2i87B02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.61 48.0 3.45e-01 90.2% 55.3%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.01e-01 82.4% 70.3%
1c8zA00 3.20.90.10 Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A 0.60 46.0 2.99e-01 88.2% 91.3%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 45.0 2.74e-01 90.2% 38.5%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 3.76e-01 84.3% 78.3%
3sokB00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.58 49.0 3.55e-01 94.1% 68.3%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 48.0 4.75e-01 100.0% 100.0%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 43.0 3.14e-01 86.3% 45.8%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.58 46.0 4.17e-01 90.2% 94.4%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.58 46.0 3.54e-01 96.1% 74.3%
1lv9A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 47.0 4.47e-01 100.0% 81.2%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 39.0 3.50e-01 76.5% 88.6%
1ulvA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 40.0 2.63e-01 80.4% 29.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.56 41.0 3.98e-01 86.3% 79.4%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 41.0 2.80e-01 80.4% 67.9%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 40.0 3.88e-01 80.4% 74.6%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 42.0 3.36e-01 90.2% 78.0%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 42.0 3.65e-01 82.4% 88.6%
5e6zC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.28e-01 78.4% 60.4%
1h6hA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 38.0 2.91e-01 76.5% 61.5%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 37.0 2.93e-01 76.5% 86.9%
4f98A00 2.30.140.50 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Protein of unknown function DUF2790 0.54 47.0 4.41e-01 98.0% 85.5%
1lf6A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 40.0 2.60e-01 82.4% 30.0%
2p25A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 40.0 3.26e-01 90.2% 42.0%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 43.0 3.93e-01 100.0% 66.7%
1c3kA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.54 39.0 3.01e-01 86.3% 86.7%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 36.0 2.60e-01 72.5% 46.6%
2rk0A01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 43.0 3.41e-01 98.0% 90.9%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.53 40.0 3.44e-01 86.3% 64.0%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.52 41.0 3.50e-01 94.1% 63.0%
1fhoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 37.0 2.96e-01 82.4% 37.0%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 2.69e-01 100.0% 32.7%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 38.0 2.79e-01 84.3% 68.8%
2i00A03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.51 42.0 3.50e-01 96.1% 52.6%
3itwA02 3.30.720.110 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 39.0 3.84e-01 90.2% 89.3%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 44.0 2.68e-01 98.0% 32.6%
2x5gA00 3.30.720.60 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 43.0 3.63e-01 98.0% 60.4%
5gvyA00 2.100.10.30 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain 0.51 40.0 3.11e-01 100.0% 74.5%
3g12B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.50 38.0 3.07e-01 86.3% 44.2%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 42.0 3.43e-01 100.0% 67.3%
3j7aF02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.50 35.0 3.57e-01 76.5% 100.0%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3899072 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.88 81.0 7.17e-01 100.0% 72.9%
3869511 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.84 77.0 6.15e-01 100.0% 53.7%
3859059 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.82 74.0 6.07e-01 100.0% 56.7%
4205423 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.82 73.0 6.39e-01 100.0% 69.3%
1700100 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.81 73.0 6.89e-01 100.0% 83.6%
3915693 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.81 72.0 6.68e-01 100.0% 78.5%
1032344 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.80 70.0 6.00e-01 100.0% 61.7%
3883586 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.80 71.0 6.26e-01 100.0% 68.0%
3890480 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.79 70.0 6.14e-01 100.0% 70.7%
3764537 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.79 69.0 5.92e-01 100.0% 62.5%
3898211 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 69.0 6.13e-01 100.0% 68.9%
3911547 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 69.0 5.83e-01 100.0% 62.4%
4424678 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 68.0 6.35e-01 100.0% 78.5%
2055300 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 68.0 5.69e-01 100.0% 57.3%
3894564 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.78 68.0 5.82e-01 100.0% 61.4%
4813310 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.77 66.0 6.03e-01 100.0% 73.1%
3912274 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.77 66.0 5.94e-01 100.0% 70.0%
3880422 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.77 66.0 6.01e-01 100.0% 72.1%
3894506 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 65.0 5.87e-01 100.0% 70.0%
3896688 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 65.0 6.18e-01 100.0% 81.7%
4971094 802.1.1.0 ↗ a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.76 51.0 3.73e-01 70.6% 83.0%
3541613 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 64.0 5.87e-01 100.0% 72.1%
3842884 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 64.0 5.87e-01 100.0% 72.1%
665 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 64.0 5.90e-01 100.0% 73.1%
3856611 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.76 64.0 6.00e-01 100.0% 77.8%
3878850 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.75 65.0 5.78e-01 100.0% 68.0%
None — 0.75 55.0 3.23e-01 78.4% 48.3%
3891033 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.74 62.0 5.61e-01 100.0% 68.5%
3918073 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.74 64.0 5.79e-01 100.0% 74.3%
1558587 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.73 64.0 5.57e-01 100.0% 64.9%
4966737 2.1.1.9 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.73 45.0 4.23e-01 76.5% 51.7%
1094905 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.71 62.0 5.62e-01 100.0% 72.9%
3285626 4090.1.1.0 ↗ a+b two layers › BH3703-like › BH3703-like › BH3703-like 0.70 52.0 3.69e-01 80.4% 27.1%
3659060 3556.1.1.1 ↗ a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 0.69 52.0 3.97e-01 82.4% 41.7%
3290151 4090.1.1.0 ↗ a+b two layers › BH3703-like › BH3703-like › BH3703-like 0.69 50.0 3.75e-01 78.4% 32.0%
4295522 3556.1.1.1 ↗ a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 0.69 53.0 4.20e-01 84.3% 50.5%
3434770 3556.1.1.1 ↗ a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 0.68 53.0 4.21e-01 84.3% 50.5%
3346946 3556.1.1.1 ↗ a+b two layers › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › Uncharacterized Protein Rru_A0810 › DUF3223 0.68 53.0 4.08e-01 84.3% 46.9%
3422528 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 51.0 4.85e-01 84.3% 81.7%
None — 0.66 55.0 3.66e-01 96.1% 74.9%
3400787 5.1.4.408 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C 0.66 49.0 2.82e-01 82.4% 12.1%
3281056 4205.1.1.0 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.66 50.0 3.37e-01 80.4% 44.0%
5076798 321.1.1.7 ↗ a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 0.66 46.0 2.73e-01 74.5% 64.8%
3557162 5.1.5.52 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › EMC1_C 0.65 49.0 2.83e-01 82.4% 12.9%
3284762 4090.1.1.0 ↗ a+b two layers › BH3703-like › BH3703-like › BH3703-like 0.65 47.0 3.42e-01 78.4% 29.0%
4051690 220.1.1.126 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 0.65 52.0 4.19e-01 90.2% 81.0%
3347210 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 53.0 4.43e-01 90.2% 81.8%
3861438 220.1.1.174 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros 0.65 51.0 3.89e-01 86.3% 75.8%
3995669 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 51.0 3.27e-01 88.2% 99.2%
3523526 220.1.1.174 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros 0.64 50.0 3.95e-01 86.3% 82.7%
4159881 220.1.1.197 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 0.64 47.0 3.90e-01 80.4% 74.7%
5073368 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.37e-01 90.2% 61.4%
3229321 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.63 47.0 3.08e-01 82.4% 36.0%
3733922 247.1.1.42 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_2, Lactamase_B_4 0.63 42.0 2.36e-01 70.6% 27.8%
3575808 247.1.1.23 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2+Lactamase_B_4 0.63 46.0 2.57e-01 80.4% 28.0%
3695460 247.1.1.23 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2+Lactamase_B_4 0.62 42.0 2.32e-01 70.6% 27.1%
3257931 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.62 47.0 4.00e-01 88.2% 81.1%
3236367 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 46.0 3.39e-01 82.4% 55.9%
4578663 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.61 45.0 4.17e-01 82.4% 84.3%
3941152 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 49.0 4.66e-01 98.0% 81.5%
3555960 827.1.1.1 ↗ a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain › Integrin_B_tail 0.61 49.0 4.26e-01 94.1% 83.5%
3973606 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 44.0 4.31e-01 78.4% 85.5%
3561257 252.1.1.1 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.60 43.0 4.11e-01 80.4% 100.0%
None — 0.60 45.0 2.70e-01 86.3% 31.3%
3929448 247.1.1.29 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2, Anti-Pycsar_Apyc1 0.60 44.0 2.47e-01 80.4% 27.3%
3650177 1.1.1.20 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N 0.59 46.0 3.04e-01 88.2% 63.0%
3272155 247.1.1.30 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 0.59 43.0 2.40e-01 80.4% 26.9%
3879163 247.1.1.31 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_4, Anti-Pycsar_Apyc1 0.58 42.0 2.37e-01 80.4% 25.3%
3377637 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 42.0 2.76e-01 82.4% 15.6%
3325087 1.1.1.28 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N 0.57 46.0 2.75e-01 90.2% 36.1%
3374669 1.1.1.20 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N 0.57 46.0 2.76e-01 90.2% 35.8%
3694693 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.57 43.0 4.09e-01 90.2% 80.0%
4837879 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.57 38.0 2.55e-01 70.6% 38.2%
3517944 247.1.1.23 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2+Lactamase_B_4 0.57 39.0 2.20e-01 72.5% 27.4%
3272286 220.1.1.174 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Cybc1_Eros 0.56 44.0 3.50e-01 86.3% 77.3%
4504508 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.56 47.0 4.10e-01 100.0% 80.0%
2814969 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.56 42.0 3.11e-01 84.3% 76.0%
4932378 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 47.0 4.53e-01 100.0% 96.7%
4602962 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.56 47.0 3.50e-01 100.0% 71.3%
4946689 3880.1.1.2 ↗ beta barrels › Glycoside hydrolase family 127 C-terminal domain › Glycoside hydrolase family 127 C-terminal domain › Glycoside hydrolase family 127 C-terminal domain › Glyco_hydro127C 0.56 43.0 3.59e-01 90.2% 63.0%
6235 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.55 38.0 2.64e-01 74.5% 62.9%
3282644 2.24.1.2 ↗ beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF7489 0.54 41.0 3.93e-01 88.2% 98.5%
5035086 2.1.1.2 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.54 46.0 4.40e-01 100.0% 91.7%
5082853 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.54 38.0 2.96e-01 74.5% 70.0%
3842048 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 42.0 2.55e-01 96.1% 17.5%
5060170 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.53 35.0 2.26e-01 70.6% 47.3%
3927411 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.52 39.0 4.07e-01 84.3% 100.0%
3968292 3372.1.1.1 ↗ beta barrels › hypothetical protein PA3229 › hypothetical protein PA3229 › hypothetical protein PA3229 › DUF2790 0.52 44.0 4.35e-01 98.0% 94.5%
3848256 247.1.1.41 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_4, Anti-Pycsar_Apyc1 0.52 36.0 2.06e-01 74.5% 39.9%
None — 0.51 34.0 2.52e-01 74.5% 48.0%
5052512 2003.1.3.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 0.50 38.0 2.73e-01 96.1% 54.6%
D2 medium residues 101-159
PDB
Domain cluster: rep: chemokine_vCXCL2__NP_612754__Panine_betaherpesvirus_2__188763__D100-147