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chitinase

Euk-Vir

Buzura_suppressaria_nucleopolyhedrovirus

chitinase__YP_009001828__Buzura_suppressaria_nucleopolyhedrovirus__74320

Identity

Accession:
YP_009001828 ↗
Protein ID:
chitinase
Kingdom:
euk

Quality

77.5 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Buzura_suppressaria_nucleopolyhedrovirus

TaxID: 74320

Cluster

View cluster (35 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-124
PDB
Domain cluster: rep: chitinase__YP_009116977__Pseudoplusia_includens_SNPV_IE__1592335__D28-126
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08329.17 best ChitinaseA_N 126.9 5.70e-37 100.0% 75.9%
D2 medium residues 150-318_524-565
PDB
D3 medium residues 319-430
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00704.35 best Glyco_hydro_18 74.4 1.90e-20 99.1% 31.2%
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ctnA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.94 92.0 6.12e-01 100.0% 31.5%
1itxA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.90 86.0 5.85e-01 100.0% 34.1%
1kfwA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.89 85.0 5.68e-01 100.0% 33.1%
1d2kA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.89 85.0 5.81e-01 99.1% 45.6%
1jndA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.86 80.0 5.63e-01 100.0% 35.6%
3w4rA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.86 81.0 5.71e-01 100.0% 36.4%
4w5uB01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.86 78.0 5.45e-01 100.0% 34.3%
1hjxA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.86 81.0 5.77e-01 99.1% 51.2%
3alfA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.84 79.0 5.73e-01 99.1% 52.9%
3simA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.73 55.0 4.05e-01 100.0% 31.6%
6cafA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.69 51.0 3.76e-01 99.1% 30.2%
4zeoH02 3.40.50.10470 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 0.68 44.0 3.89e-01 100.0% 45.6%
3gohA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 39.0 3.99e-01 97.3% 57.8%
3nwrA02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.67 46.0 3.40e-01 95.5% 27.6%
1zkdA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 47.0 4.10e-01 100.0% 50.0%
6znjB01 3.40.50.10950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 40.0 3.71e-01 88.4% 48.6%
4eexA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 37.0 3.50e-01 96.4% 46.4%
3n05A02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 42.0 3.54e-01 95.5% 41.3%
3ngxA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 35.0 3.45e-01 100.0% 52.0%
4cjxA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 38.0 3.58e-01 100.0% 52.1%
3ua3A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 44.0 3.86e-01 100.0% 53.8%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 46.0 3.74e-01 98.2% 46.3%
7nadx02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 32.0 2.47e-01 100.0% 26.2%
3eozB01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.55 38.0 3.37e-01 71.4% 53.7%
3ip1A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 41.0 3.73e-01 100.0% 60.0%
1i9sA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 38.0 3.21e-01 73.2% 50.3%
3d2lC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 34.0 2.98e-01 97.3% 39.3%
4n7bA03 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.53 36.0 3.83e-01 80.4% 79.4%
3f9tA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 41.0 3.13e-01 83.9% 39.5%
4rv9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 46.0 3.84e-01 100.0% 98.0%
2dgmA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 43.0 3.18e-01 91.1% 41.8%
3f2iF00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.51 35.0 3.11e-01 71.4% 51.2%
3m6aA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 34.0 3.16e-01 70.5% 83.3%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.95 92.0 6.32e-01 100.0% 35.7%
1097799 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.95 92.0 6.26e-01 100.0% 38.8%
None — 0.92 89.0 6.12e-01 100.0% 36.1%
4353352 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.90 87.0 5.63e-01 100.0% 28.8%
3290989 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.90 87.0 5.65e-01 100.0% 32.8%
3414722 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.90 81.0 4.40e-01 100.0% 6.6%
2142057 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.90 81.0 6.01e-01 100.0% 42.0%
4020619 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.90 86.0 5.58e-01 99.1% 36.4%
5026482 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.90 86.0 5.74e-01 100.0% 33.4%
4837477 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.89 85.0 6.17e-01 100.0% 47.1%
3500831 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.89 84.0 5.66e-01 99.1% 41.1%
3216871 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.88 84.0 5.72e-01 100.0% 33.1%
4194705 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.88 82.0 5.55e-01 100.0% 31.1%
4424677 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.88 83.0 5.58e-01 99.1% 40.5%
1933297 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.88 84.0 6.17e-01 100.0% 42.9%
3871813 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.88 82.0 5.44e-01 100.0% 29.1%
4883687 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.87 83.0 5.89e-01 100.0% 38.4%
4225707 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.86 73.0 4.92e-01 100.0% 28.0%
3174286 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.86 82.0 5.23e-01 99.1% 33.5%
3235034 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.86 74.0 4.96e-01 99.1% 26.9%
3099008 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.86 81.0 5.82e-01 100.0% 43.4%
3397617 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.86 81.0 5.36e-01 100.0% 28.6%
1870464 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.85 80.0 5.45e-01 100.0% 37.8%
4020699 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.84 75.0 4.92e-01 100.0% 26.1%
3215199 284.2.1.1 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › Glyco_hydro_18 0.84 70.0 4.79e-01 98.2% 28.2%
4596140 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.84 76.0 4.74e-01 100.0% 20.6%
4371127 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.83 79.0 5.19e-01 100.0% 42.9%
3191112 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.83 73.0 5.08e-01 100.0% 32.2%
3395287 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.83 79.0 5.30e-01 100.0% 46.8%
3188309 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.83 71.0 4.79e-01 100.0% 27.8%
4021602 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.83 79.0 5.31e-01 99.1% 38.9%
4013689 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.81 59.0 5.14e-01 83.9% 52.5%
3785858 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.81 76.0 5.13e-01 99.1% 38.1%
4015822 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.81 73.0 4.93e-01 100.0% 29.9%
3183666 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.80 72.0 4.71e-01 100.0% 25.6%
3929123 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.80 76.0 5.15e-01 99.1% 41.7%
3200621 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.79 76.0 5.05e-01 99.1% 35.6%
3923486 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.79 73.0 4.93e-01 99.1% 39.2%
3257930 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.76 65.0 4.80e-01 99.1% 37.7%
4591558 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.75 70.0 4.98e-01 99.1% 44.1%
3728201 2003.1.1.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N 0.67 44.0 3.70e-01 97.3% 39.5%
5001124 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.64 45.0 3.94e-01 97.3% 46.9%
4010952 2003.1.1.70 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N_2 0.64 39.0 3.04e-01 98.2% 27.8%
5066062 7584.1.1.1 ↗ a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding 0.62 44.0 4.05e-01 99.1% 56.0%
3520303 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.62 43.0 3.97e-01 100.0% 55.9%
4028406 2496.1.1.1 ↗ a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › CRAL_TRIO 0.62 53.0 4.27e-01 100.0% 48.2%
3743491 2004.1.1.310 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CMS1 0.60 43.0 3.68e-01 100.0% 44.2%
4998999 2003.1.1.57 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › IlvN 0.60 38.0 3.55e-01 97.3% 50.0%
3728107 2004.1.1.60 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI 0.58 46.0 3.79e-01 100.0% 47.0%
3304223 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.58 46.0 3.59e-01 86.6% 92.2%
3913040 2004.1.1.310 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CMS1 0.57 41.0 3.47e-01 100.0% 42.0%
4285317 2003.1.1.74 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glu_dehyd_C 0.57 38.0 3.25e-01 95.5% 40.0%
3646297 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 43.0 3.43e-01 99.1% 41.4%
3289802 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.55 38.0 2.48e-01 73.2% 25.3%
3940066 4143.1.1.4 ↗ a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › Pus10_N_euk 0.54 42.0 3.52e-01 83.9% 79.0%
3743549 7525.1.1.1 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 0.54 38.0 3.15e-01 73.2% 52.5%
5041989 7573.1.1.1 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.54 39.0 3.56e-01 100.0% 55.8%
3925882 7525.1.1.1 ↗ a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 0.54 37.0 3.06e-01 71.4% 45.7%
4094056 2003.1.1.74 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glu_dehyd_C 0.51 44.0 3.71e-01 94.6% 91.4%
4474455 7573.1.1.1 ↗ a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran 0.50 36.0 3.26e-01 90.2% 51.8%
D4 medium residues 431-523
PDB
Domain cluster: rep: chitinase_protein__YP_007250531__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D436-505
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00704.35 best Glyco_hydro_18 55.7 9.10e-15 100.0% 25.9%