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class_3_lipase
Euk-VirPithovirus_sibericum
class_3_lipase__YP_009001114__Pithovirus_sibericum__1450746
Identity
- Accession:
- YP_009001114 ↗
- Protein ID:
- class_3_lipase
- Kingdom:
- euk
Quality
72.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Pithoviridae›
Alphapithovirus›
Pithovirus_sibericum
TaxID: 1450746
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-139_145-298
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01764.32 best | Lipase_3 | 78.6 | 6.20e-22 | 66.7% | 97.9% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3g7nB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.84 | 64.0 | 6.50e-01 | 98.8% | 78.6% |
| 3uueA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.81 | 65.0 | 6.35e-01 | 100.0% | 76.0% |
| 1gt6A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.81 | 65.0 | 6.47e-01 | 97.3% | 79.6% |
| 2yijB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.72 | 66.0 | 5.62e-01 | 94.6% | 69.7% |
| 1ispA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 35.0 | 4.15e-01 | 86.0% | 75.4% |
| 3hc7A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 39.0 | 4.55e-01 | 86.8% | 89.5% |
| 2i3dB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 38.0 | 4.15e-01 | 79.5% | 75.8% |
| 2ohhA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.56 | 28.0 | 3.57e-01 | 82.9% | 81.2% |
| 4ao8A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 40.0 | 4.18e-01 | 80.6% | 80.8% |
| 3ajaB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 41.0 | 4.09e-01 | 87.6% | 76.9% |
| 6jmgB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 29.0 | 3.48e-01 | 84.1% | 78.0% |
| 2zshA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 41.0 | 3.77e-01 | 82.2% | 73.7% |
| 6feaB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.51 | 30.0 | 3.84e-01 | 81.8% | 98.6% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 33.0 | 3.59e-01 | 87.6% | 76.7% |
| 3h2gA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 40.0 | 3.93e-01 | 80.6% | 78.1% |
| 5ao9A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 4.05e-01 | 84.5% | 78.6% |
| 2d5lA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 39.0 | 3.92e-01 | 78.7% | 81.4% |
| 5mifA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 40.0 | 3.83e-01 | 82.2% | 73.8% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 138233 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.84 | 64.0 | 6.46e-01 | 98.8% | 78.0% |
| 3990465 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.83 | 62.0 | 6.18e-01 | 91.5% | 74.5% |
| 3598141 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.81 | 66.0 | 6.54e-01 | 94.6% | 79.6% |
| 3598186 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.81 | 59.0 | 6.50e-01 | 89.1% | 88.8% |
| 3933733 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.81 | 64.0 | 6.34e-01 | 94.2% | 78.1% |
| 3595120 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.80 | 65.0 | 6.48e-01 | 93.4% | 79.9% |
| 3597044 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.78 | 67.0 | 6.21e-01 | 91.5% | 72.7% |
| 3598841 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.77 | 59.0 | 5.86e-01 | 89.1% | 75.1% |
| 3231629 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.77 | 65.0 | 5.99e-01 | 95.0% | 70.5% |
| 3445914 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.77 | 73.0 | 6.10e-01 | 98.1% | 68.4% |
| 3719200 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.76 | 67.0 | 6.14e-01 | 95.3% | 72.3% |
| 3329145 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.75 | 60.0 | 5.44e-01 | 98.4% | 63.9% |
| 2874446 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.74 | 68.0 | 5.67e-01 | 94.6% | 68.7% |
| 3380248 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.73 | 70.0 | 6.15e-01 | 98.8% | 80.8% |
| 3648424 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.73 | 70.0 | 5.75e-01 | 98.8% | 70.2% |
| 4028745 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.73 | 70.0 | 6.01e-01 | 99.6% | 72.5% |
| 2896855 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.72 | 56.0 | 5.37e-01 | 99.2% | 70.2% |
| 3274649 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.72 | 60.0 | 5.60e-01 | 96.9% | 71.9% |
| 3379144 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.71 | 68.0 | 5.76e-01 | 99.6% | 76.7% |
| 3682840 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.71 | 65.0 | 5.70e-01 | 95.0% | 86.3% |
| 3830828 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.71 | 61.0 | 5.73e-01 | 97.7% | 74.8% |
| 3349137 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.69 | 59.0 | 5.41e-01 | 99.6% | 69.8% |
| 3816715 | 7579.1.1.15 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3,Lipase3_N | 0.67 | 63.0 | 5.48e-01 | 100.0% | 67.9% |
| 3313462 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.64 | 60.0 | 5.11e-01 | 96.9% | 69.5% |
| 4019020 | 7579.1.1.51 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF676 | 0.58 | 42.0 | 4.08e-01 | 72.5% | 81.1% |
| 5039456 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.58 | 35.0 | 3.92e-01 | 86.4% | 75.4% |
| 4096204 | 7579.1.1.17 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S15 | 0.57 | 37.0 | 3.90e-01 | 79.1% | 70.6% |
| 4014225 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.56 | 40.0 | 3.96e-01 | 72.5% | 82.5% |
| 3211625 | 7579.1.1.47 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BD-FAE | 0.55 | 41.0 | 4.11e-01 | 84.5% | 74.1% |
| 135727 | 7579.1.1.11 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Cutinase | 0.54 | 42.0 | 4.29e-01 | 90.7% | 81.0% |
| 3233916 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.54 | 42.0 | 4.16e-01 | 84.5% | 75.6% |
| 4029025 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.54 | 38.0 | 3.64e-01 | 86.4% | 62.2% |
| 3943166 | 2007.1.2.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_1 | 0.54 | 29.0 | 3.84e-01 | 84.9% | 95.7% |
| 3508532 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.53 | 42.0 | 3.87e-01 | 82.6% | 83.7% |
| 3785000 | 7579.1.1.39 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Arb2-like | 0.52 | 42.0 | 3.93e-01 | 83.7% | 75.7% |
| 2664650 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.52 | 30.0 | 3.64e-01 | 81.8% | 86.2% |
| 3637418 | 7579.1.1.47 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BD-FAE | 0.52 | 40.0 | 3.79e-01 | 80.6% | 81.0% |
| 3600089 | 7579.1.1.51 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF676 | 0.51 | 43.0 | 3.66e-01 | 86.8% | 77.0% |
| 3902893 | 7579.1.1.69 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › ABHD18 | 0.51 | 40.0 | 3.60e-01 | 80.2% | 71.6% |
| 1716904 | 7579.1.1.4 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9,BD-FAE | 0.51 | 41.0 | 4.05e-01 | 84.5% | 78.6% |
| 3605429 | 7579.1.1.51 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF676 | 0.50 | 44.0 | 3.90e-01 | 91.5% | 83.1% |
| 5030274 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.50 | 35.0 | 3.45e-01 | 84.9% | 64.9% |