←Back to structures
coat_protein
Euk-VirPelargonium_flower_break_virus
coat_protein__NP_945127__Pelargonium_flower_break_virus__35291
Identity
- Accession:
- NP_945127 ↗
- Protein ID:
- coat_protein
- Kingdom:
- euk
Quality
83.0
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Tolucaviricetes›
Tolivirales›
Tombusviridae›
Alphacarmovirus›
Pelargonium_flower_break_virus
TaxID: 35291
Cluster
View cluster (39 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 79-239
Domain cluster:
rep: structural_polyprotein__YP_009333175__Bastrovirus-like_virus_VietNam_Bat_17819_21__1906170__D141-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00729.25 best | Viral_coat | 120.9 | 9.70e-35 | 100.0% | 85.0% |
CATH (90)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1opoC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.97 | 95.0 | 9.42e-01 | 100.0% | 97.0% |
| 3zxaC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.95 | 90.0 | 8.46e-01 | 100.0% | 83.1% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.93 | 91.0 | 8.71e-01 | 100.0% | 92.1% |
| 2tbvA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.93 | 90.0 | 7.17e-01 | 100.0% | 57.0% |
| 6mrmC01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.92 | 88.0 | 8.66e-01 | 98.8% | 95.3% |
| 2ztnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.90 | 87.0 | 8.13e-01 | 100.0% | 94.7% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.90 | 87.0 | 7.61e-01 | 100.0% | 84.2% |
| 2izwC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.90 | 86.0 | 7.76e-01 | 100.0% | 79.8% |
| 1c8nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.89 | 86.0 | 7.61e-01 | 100.0% | 82.6% |
| 4fy1100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.89 | 86.0 | 7.59e-01 | 100.0% | 82.0% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 85.0 | 8.05e-01 | 100.0% | 94.6% |
| 5yl1A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 84.0 | 8.07e-01 | 100.0% | 100.0% |
| 4rft000 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.88 | 82.0 | 8.20e-01 | 100.0% | 95.7% |
| 1f2nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.87 | 84.0 | 7.48e-01 | 100.0% | 83.5% |
| 4nwvA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.87 | 83.0 | 7.92e-01 | 100.0% | 88.6% |
| 5ewnA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.86 | 82.0 | 7.84e-01 | 100.0% | 96.7% |
| 1ng0C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.86 | 83.0 | 7.33e-01 | 100.0% | 83.9% |
| 5j98B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.83 | 78.0 | 6.52e-01 | 100.0% | 76.2% |
| 4qpiC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 77.0 | 6.60e-01 | 100.0% | 75.6% |
| 3napC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 77.0 | 6.30e-01 | 100.0% | 75.0% |
| 2ws9300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 77.0 | 6.75e-01 | 100.0% | 78.3% |
| 1auyB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 73.0 | 6.91e-01 | 100.0% | 80.4% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 76.0 | 6.56e-01 | 100.0% | 77.3% |
| 5aooC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 76.0 | 6.76e-01 | 100.0% | 78.6% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 76.0 | 6.48e-01 | 100.0% | 68.4% |
| 1ihmB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 76.0 | 6.75e-01 | 100.0% | 77.3% |
| 5aca300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 75.0 | 6.69e-01 | 100.0% | 78.4% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 72.0 | 6.89e-01 | 100.0% | 83.1% |
| 3cjiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 75.0 | 6.50e-01 | 100.0% | 78.2% |
| 5mqcB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 75.0 | 6.58e-01 | 100.0% | 72.7% |
| 5k0uB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 75.0 | 6.49e-01 | 100.0% | 76.6% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 75.0 | 6.31e-01 | 100.0% | 67.1% |
| 1b35C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 74.0 | 6.07e-01 | 100.0% | 68.8% |
| 5mqcC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.79 | 74.0 | 6.20e-01 | 100.0% | 74.2% |
| 1tme300 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 73.0 | 6.42e-01 | 100.0% | 77.8% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 74.0 | 6.90e-01 | 100.0% | 85.5% |
| 1fmd200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 73.0 | 6.52e-01 | 100.0% | 73.4% |
| 2ws9201 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 73.0 | 6.82e-01 | 100.0% | 89.2% |
| 6jhsA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 72.0 | 6.08e-01 | 100.0% | 68.1% |
| 1tme200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 73.0 | 6.14e-01 | 100.0% | 81.2% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 72.0 | 5.71e-01 | 100.0% | 76.2% |
| 2gh8A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 73.0 | 6.67e-01 | 100.0% | 81.2% |
| 4qpiB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 72.0 | 6.44e-01 | 100.0% | 75.6% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 72.0 | 5.69e-01 | 100.0% | 75.1% |
| 1ohfA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 71.0 | 5.73e-01 | 100.0% | 90.5% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.75 | 60.0 | 6.24e-01 | 100.0% | 89.9% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 70.0 | 6.07e-01 | 100.0% | 71.4% |
| 2y26A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 68.0 | 5.25e-01 | 96.9% | 46.5% |
| 4rs5A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 70.0 | 6.24e-01 | 100.0% | 81.4% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 69.0 | 5.75e-01 | 100.0% | 79.6% |
| 1pgw200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 5.29e-01 | 100.0% | 49.9% |
| 2ws9100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 5.93e-01 | 100.0% | 78.0% |
| 6sk6A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 68.0 | 5.69e-01 | 100.0% | 69.2% |
| 1stmA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.74 | 60.0 | 6.36e-01 | 100.0% | 96.5% |
| 6eiwA01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 68.0 | 6.41e-01 | 100.0% | 100.0% |
| 7chkB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 57.0 | 6.29e-01 | 95.0% | 100.0% |
| 3jciA00 | 2.60.120.950 | Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein | 0.73 | 68.0 | 6.41e-01 | 100.0% | 95.3% |
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.73 | 62.0 | 5.86e-01 | 99.4% | 76.3% |
| 1bev100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 67.0 | 5.63e-01 | 100.0% | 66.4% |
| 1fmd100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 57.0 | 5.46e-01 | 100.0% | 71.1% |
| 4oq8A00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.71 | 53.0 | 5.56e-01 | 98.8% | 85.4% |
| 8b38A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 64.0 | 5.69e-01 | 98.1% | 95.1% |
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 39.0 | 4.79e-01 | 96.9% | 85.3% |
| 1a6cA02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 63.0 | 6.30e-01 | 98.8% | 94.5% |
| 3napA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 63.0 | 5.28e-01 | 100.0% | 68.6% |
| 2qfeA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 48.0 | 5.10e-01 | 96.3% | 87.1% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 47.0 | 5.23e-01 | 97.5% | 98.4% |
| 3demA03 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.63 | 41.0 | 4.73e-01 | 96.3% | 92.1% |
| 2df7A02 | 2.60.120.660 | Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus | 0.62 | 51.0 | 5.38e-01 | 98.8% | 100.0% |
| 2id4A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 48.0 | 5.18e-01 | 100.0% | 97.8% |
| 1cd3F00 | 2.60.169.10 | Mainly Beta › Sandwich › Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1 › Microviridae F protein | 0.60 | 55.0 | 4.02e-01 | 100.0% | 95.1% |
| 6mnjA01 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 49.0 | 5.05e-01 | 95.0% | 94.8% |
| 1umhA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 52.0 | 4.98e-01 | 97.5% | 97.3% |
| 4bz4A00 | 2.60.120.1220 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 51.0 | 4.76e-01 | 95.0% | 95.5% |
| 3gqcC04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.57 | 41.0 | 4.68e-01 | 98.1% | 100.0% |
| 4mxwD00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 45.0 | 4.89e-01 | 97.5% | 100.0% |
| 3w5mA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 38.0 | 4.34e-01 | 96.3% | 94.2% |
| 1m06G00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 4.63e-01 | 95.7% | 90.9% |
| 1jhjA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 45.0 | 4.57e-01 | 96.9% | 88.2% |
| 4pqqA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 48.0 | 4.88e-01 | 98.1% | 96.8% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 45.0 | 4.78e-01 | 94.4% | 100.0% |
| 2bpa200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 47.0 | 4.64e-01 | 96.3% | 90.9% |
| 2okxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 42.0 | 4.00e-01 | 88.2% | 70.5% |
| 1nlrA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.53 | 45.0 | 4.08e-01 | 93.8% | 93.2% |
| 2w91A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 47.0 | 4.55e-01 | 96.9% | 97.8% |
| 1fx5B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 47.0 | 4.11e-01 | 98.8% | 98.3% |
| 3iiiA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 47.0 | 4.52e-01 | 97.5% | 98.3% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 47.0 | 4.57e-01 | 98.1% | 89.8% |
| 2e26A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 44.0 | 4.49e-01 | 97.5% | 98.1% |
| 1g43A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.50 | 43.0 | 4.32e-01 | 95.7% | 93.8% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1724852 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.97 | 95.0 | 9.39e-01 | 100.0% | 96.4% |
| 215519 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.95 | 90.0 | 7.10e-01 | 100.0% | 53.2% |
| 1758310 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.93 | 90.0 | 8.14e-01 | 100.0% | 79.9% |
| 2542980 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.92 | 88.0 | 8.21e-01 | 98.8% | 84.3% |
| 289259 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.90 | 87.0 | 7.58e-01 | 100.0% | 83.1% |
| 146646 | 10.2.1.30 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SP2 | 0.90 | 86.0 | 8.03e-01 | 100.0% | 92.2% |
| 328688 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.90 | 86.0 | 7.76e-01 | 100.0% | 79.8% |
| 1232 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.90 | 86.0 | 7.97e-01 | 100.0% | 95.4% |
| 1409656 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.89 | 86.0 | 7.61e-01 | 100.0% | 82.6% |
| 1444532 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.89 | 86.0 | 7.59e-01 | 100.0% | 82.0% |
| 1693524 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.89 | 83.0 | 7.93e-01 | 100.0% | 86.2% |
| 1866058 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.88 | 85.0 | 8.05e-01 | 100.0% | 94.6% |
| 2589532 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.88 | 85.0 | 7.86e-01 | 100.0% | 92.8% |
| 2441244 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.88 | 84.0 | 7.42e-01 | 100.0% | 80.9% |
| 1693522 | 10.2.1.49 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid-VNN | 0.87 | 83.0 | 7.90e-01 | 100.0% | 88.1% |
| 1233 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.87 | 83.0 | 7.80e-01 | 100.0% | 93.7% |
| 1234 | 10.2.1.7 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat | 0.86 | 83.0 | 7.71e-01 | 100.0% | 95.3% |
| 2539045 | 10.2.1.12 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Luteo_coat | 0.86 | 72.0 | 7.62e-01 | 100.0% | 95.9% |
| 1877512 | 10.2.1.32 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Astro_capsid_N | 0.85 | 81.0 | 7.70e-01 | 100.0% | 96.7% |
| 2389609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.83 | 78.0 | 6.70e-01 | 100.0% | 75.3% |
| 1405130 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.82 | 78.0 | 6.62e-01 | 100.0% | 75.6% |
| 2044957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.82 | 78.0 | 6.59e-01 | 100.0% | 74.4% |
| 296002 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.82 | 74.0 | 6.94e-01 | 100.0% | 80.4% |
| 140024 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.82 | 77.0 | 6.30e-01 | 100.0% | 75.0% |
| 139106 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.82 | 77.0 | 6.76e-01 | 100.0% | 78.3% |
| 1933849 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 76.0 | 6.73e-01 | 100.0% | 77.6% |
| 1489398 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 76.0 | 6.47e-01 | 100.0% | 74.9% |
| 2982483 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.81 | 76.0 | 6.58e-01 | 100.0% | 77.2% |
| 140027 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.80 | 76.0 | 6.48e-01 | 100.0% | 68.4% |
| 2440135 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.80 | 76.0 | 6.64e-01 | 100.0% | 80.8% |
| 1687952 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.80 | 75.0 | 6.69e-01 | 100.0% | 78.4% |
| 169772 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.80 | 75.0 | 6.50e-01 | 100.0% | 78.2% |
| 2862065 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.80 | 72.0 | 7.04e-01 | 100.0% | 87.4% |
| 31171 | 10.2.1.15 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat | 0.80 | 71.0 | 6.76e-01 | 100.0% | 81.3% |
| 2983138 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.79 | 75.0 | 6.46e-01 | 100.0% | 76.9% |
| 1211 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 75.0 | 6.31e-01 | 100.0% | 67.1% |
| 2099164 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 74.0 | 6.07e-01 | 100.0% | 68.8% |
| 4882965 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 61.0 | 6.45e-01 | 96.3% | 87.8% |
| 4814721 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.79 | 75.0 | 6.86e-01 | 100.0% | 80.7% |
| 2044958 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 74.0 | 6.24e-01 | 100.0% | 74.4% |
| 1949031 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 74.0 | 6.20e-01 | 100.0% | 74.2% |
| 2439648 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.79 | 74.0 | 6.08e-01 | 100.0% | 71.8% |
| 1945727 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 73.0 | 6.21e-01 | 100.0% | 72.9% |
| 1264422 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 74.0 | 6.58e-01 | 100.0% | 79.5% |
| 31099 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 73.0 | 6.42e-01 | 100.0% | 77.8% |
| 2982737 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.78 | 73.0 | 6.00e-01 | 100.0% | 73.7% |
| 1405131 | 10.2.1.51 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › HAV_VP | 0.78 | 73.0 | 6.09e-01 | 100.0% | 87.8% |
| 2099173 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 73.0 | 6.08e-01 | 100.0% | 81.7% |
| 4872939 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.78 | 73.0 | 6.64e-01 | 100.0% | 80.9% |
| 2579094 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.78 | 73.0 | 6.11e-01 | 100.0% | 73.9% |
| 2505858 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.78 | 72.0 | 6.71e-01 | 98.1% | 80.7% |
| 1696117 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.78 | 73.0 | 7.00e-01 | 100.0% | 88.0% |
| 4768609 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 73.0 | 6.04e-01 | 100.0% | 80.0% |
| 2982736 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.78 | 72.0 | 6.29e-01 | 100.0% | 72.2% |
| 4888111 | 10.2.1.13 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat | 0.77 | 73.0 | 6.89e-01 | 100.0% | 86.2% |
| 1867996 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 72.0 | 6.03e-01 | 100.0% | 63.5% |
| 1400716 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.77 | 72.0 | 6.44e-01 | 100.0% | 75.6% |
| 4900996 | 10.2.1.88 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv, Calici_coat | 0.76 | 62.0 | 5.95e-01 | 87.0% | 74.5% |
| 1713715 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.76 | 71.0 | 5.79e-01 | 100.0% | 64.2% |
| 3344591 | 10.2.1.81 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › MP | 0.76 | 63.0 | 5.79e-01 | 99.4% | 68.3% |
| 2579093 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.76 | 71.0 | 6.21e-01 | 100.0% | 74.0% |
| 3314257 | 10.32.1.193 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MP | 0.76 | 63.0 | 6.14e-01 | 99.4% | 80.0% |
| 1114663 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.76 | 71.0 | 5.53e-01 | 100.0% | 70.3% |
| 1886797 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.76 | 70.0 | 5.98e-01 | 100.0% | 73.5% |
| 1697855 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 70.0 | 6.07e-01 | 100.0% | 71.4% |
| 2414126 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.75 | 70.0 | 6.07e-01 | 100.0% | 72.2% |
| 2526957 | 10.2.1.1 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv | 0.75 | 69.0 | 5.69e-01 | 100.0% | 65.6% |
| 1219 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.74 | 69.0 | 6.54e-01 | 100.0% | 92.6% |
| 140694 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.74 | 69.0 | 5.90e-01 | 100.0% | 78.0% |
| 2710690 | 10.2.1.29 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Circo_capsid | 0.73 | 68.0 | 6.33e-01 | 100.0% | 91.0% |
| 1214 | 10.2.1.38 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_N | 0.73 | 66.0 | 6.47e-01 | 97.5% | 92.6% |
| 2330242 | 10.2.1.24 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Como_LCP | 0.73 | 66.0 | 6.31e-01 | 96.9% | 88.5% |
| 2884840 | 10.2.1.50 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.73 | 67.0 | 5.47e-01 | 100.0% | 62.5% |
| 148379 | 10.2.1.69 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 | 0.73 | 67.0 | 5.43e-01 | 100.0% | 62.0% |
| 2117349 | 10.2.1.10 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cucumo_coat | 0.72 | 62.0 | 5.81e-01 | 99.4% | 76.4% |
| 3676965 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.71 | 52.0 | 5.52e-01 | 97.5% | 85.7% |
| 2797580 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.71 | 52.0 | 5.33e-01 | 98.8% | 77.8% |
| 143449 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.70 | 65.0 | 6.30e-01 | 100.0% | 95.5% |
| 3478158 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 46.0 | 5.20e-01 | 94.4% | 88.8% |
| 1215 | 10.2.1.34 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat | 0.68 | 63.0 | 6.18e-01 | 100.0% | 96.5% |
| 3893165 | 10.4.1.23 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 | 0.67 | 44.0 | 5.05e-01 | 97.5% | 91.3% |
| 3272798 | 10.32.1.3 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III | 0.66 | 53.0 | 5.69e-01 | 96.9% | 99.3% |
| 2006903 | 10.2.1.44 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › CRPV_capsid | 0.66 | 60.0 | 5.00e-01 | 100.0% | 65.0% |
| 3277376 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 53.0 | 5.64e-01 | 98.8% | 98.6% |
| 4631095 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 52.0 | 5.39e-01 | 97.5% | 92.7% |
| 3182644 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 42.0 | 4.60e-01 | 95.0% | 84.4% |
| 3241208 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.60 | 39.0 | 4.55e-01 | 98.1% | 95.5% |
| 3477245 | 10.2.1.18 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Cu2_monooxygen | 0.58 | 49.0 | 5.02e-01 | 96.9% | 94.2% |
| 5033996 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 49.0 | 4.30e-01 | 98.1% | 100.0% |
| 3648276 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.55 | 36.0 | 4.02e-01 | 100.0% | 84.8% |
| 3730925 | 10.32.1.17 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Allantoicase | 0.55 | 49.0 | 4.79e-01 | 98.1% | 97.8% |
| 3240316 | 10.32.1.180 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CEP104_N | 0.54 | 48.0 | 4.88e-01 | 94.4% | 100.0% |
| 5027771 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 35.0 | 4.15e-01 | 90.7% | 100.0% |
| 4217288 | 10.3.1.0 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like | 0.52 | 46.0 | 4.46e-01 | 95.7% | 100.0% |
D2
high
residues 246-344
Domain cluster:
rep: putative_capsid_protein__YP_009337312__Changjiang_narna-like_virus_2__1922777__D340-464
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08462.17 best | Carmo_coat_C | 24.7 | 3.00e-05 | 99.0% | 92.9% |