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coat_protein

Euk-Vir

Triticum_mosaic_virus

coat_protein__YP_002956096__Triticum_mosaic_virus__431317

Identity

Accession:
YP_002956096 ↗
Protein ID:
coat_protein
Kingdom:
euk

Quality

70.9 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Poacevirus› Triticum_mosaic_virus

TaxID: 431317

Cluster

View cluster (85 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 66-123
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4uurA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.62 42.0 3.31e-01 70.7% 75.8%
2pjqA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.53 37.0 3.30e-01 72.4% 82.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2123187 3143.1.1.2 ↗ alpha complex topology › Rift Valley fever virus nucleocapsid protein-related › Rift Valley fever virus nucleocapsid protein-related › Papaya mosaic virus capsid protein › Poty_coat 0.77 68.0 4.73e-01 100.0% 31.7%
D2 medium residues 124-248
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00767.23 best Poty_coat 85.2 7.50e-24 100.0% 47.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4833627 3143.1.1.2 ↗ alpha complex topology › Rift Valley fever virus nucleocapsid protein-related › Rift Valley fever virus nucleocapsid protein-related › Papaya mosaic virus capsid protein › Poty_coat 0.91 77.0 6.91e-01 100.0% 67.3%
4833628 3143.1.1.2 ↗ alpha complex topology › Rift Valley fever virus nucleocapsid protein-related › Rift Valley fever virus nucleocapsid protein-related › Papaya mosaic virus capsid protein › Poty_coat 0.90 83.0 7.54e-01 100.0% 75.8%
4859055 3143.1.1.2 ↗ alpha complex topology › Rift Valley fever virus nucleocapsid protein-related › Rift Valley fever virus nucleocapsid protein-related › Papaya mosaic virus capsid protein › Poty_coat 0.90 52.0 6.29e-01 83.2% 83.9%
5084053 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.53 39.0 3.18e-01 76.0% 91.3%