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coat_protein

Euk-Vir

Lake_Sarah-associated_circular_virus-12_Viruses.

coat_protein__YP_009237519__Lake_Sarah-associated_circular_virus-12_Viruses.__X

Identity

Accession:
YP_009237519 ↗
Protein ID:
coat_protein
Kingdom:
euk

Quality

72.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-190_203-267
PDB
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bcuA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.82 64.0 6.74e-01 100.0% 87.8%
6f2sH01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.79 66.0 6.53e-01 100.0% 83.3%
3kq4B03 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.68 36.0 4.81e-01 98.5% 93.8%
2wnoA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.68 36.0 4.82e-01 99.0% 93.8%
3kq4B02 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.68 37.0 4.75e-01 99.5% 91.5%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 50.0 5.05e-01 100.0% 76.7%
2yjlA00 2.60.40.2990 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 31.0 4.22e-01 77.6% 83.3%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.66 51.0 5.57e-01 100.0% 96.5%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.66 53.0 5.17e-01 100.0% 77.4%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.65 39.0 4.58e-01 100.0% 83.3%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 54.0 4.89e-01 100.0% 65.6%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.65 38.0 4.90e-01 98.0% 100.0%
1cd3F00 2.60.169.10 Mainly Beta › Sandwich › Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1 › Microviridae F protein 0.65 61.0 4.71e-01 100.0% 94.6%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.65 52.0 5.52e-01 100.0% 93.5%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 40.0 4.96e-01 100.0% 97.7%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 50.0 4.89e-01 100.0% 73.5%
4h3wA01 2.60.290.20 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › Protein of unknown function (DUF4621), C-terminal domain 0.64 40.0 4.93e-01 93.7% 100.0%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 39.0 4.87e-01 100.0% 96.9%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 42.0 5.04e-01 99.0% 98.5%
3jciA00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.64 52.0 5.39e-01 100.0% 91.6%
2q1mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 36.0 4.73e-01 99.0% 99.1%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.63 45.0 5.07e-01 100.0% 94.9%
2ws9100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 53.0 5.00e-01 100.0% 74.0%
1bev100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 51.0 4.61e-01 100.0% 64.6%
1df0A03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.62 40.0 4.93e-01 98.0% 99.3%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 46.0 5.15e-01 100.0% 96.9%
6v55A01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.62 33.0 4.24e-01 100.0% 91.1%
2kltA00 2.60.40.2030 Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain 0.61 32.0 3.57e-01 100.0% 62.8%
1tnrA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.61 41.0 4.85e-01 99.5% 97.2%
4lr4A02 2.60.120.1430 Mainly Beta › Sandwich › Jelly Rolls › 0.61 41.0 4.46e-01 100.0% 82.1%
6a48A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 41.0 4.85e-01 98.0% 100.0%
1a8mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 41.0 4.69e-01 99.5% 94.1%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 4.83e-01 100.0% 75.0%
1dg6A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 41.0 4.71e-01 100.0% 96.6%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.58 42.0 4.77e-01 99.5% 98.1%
2e26A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 41.0 4.65e-01 100.0% 96.8%
4icwA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.56 35.0 4.36e-01 79.5% 99.2%
2vovA00 2.60.120.1220 Mainly Beta › Sandwich › Jelly Rolls › 0.55 51.0 4.49e-01 98.0% 85.5%
7t7zA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.55 39.0 4.51e-01 98.0% 99.3%
2xbtA00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.55 38.0 4.27e-01 98.0% 91.1%
1wcdJ01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 50.0 4.52e-01 100.0% 74.4%
1sidF00 2.60.175.10 Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Capsid protein VP1,Polyomavirus 0.54 50.0 4.16e-01 100.0% 74.3%
2qngA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.53 37.0 4.13e-01 88.3% 87.9%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 39.0 4.42e-01 99.0% 96.9%
2uy6C01 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.53 36.0 4.24e-01 99.0% 99.3%
2ep6A01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 31.0 3.99e-01 78.5% 100.0%
4lhsA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 35.0 4.07e-01 97.6% 94.0%
1djxA03 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 33.0 4.05e-01 80.5% 100.0%
2giyB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 4.08e-01 95.6% 87.6%
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.51 40.0 4.39e-01 97.6% 98.8%
7k7jA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 41.0 4.38e-01 99.0% 97.7%
2qz5A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 35.0 3.95e-01 80.0% 93.4%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 46.0 4.47e-01 100.0% 100.0%
1lnsA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 38.0 4.04e-01 100.0% 88.2%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2841541 10.2.1.11 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gemini_coat 0.79 66.0 6.49e-01 100.0% 82.1%
3788140 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.77 40.0 4.74e-01 98.0% 71.0%
5067639 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.76 40.0 5.03e-01 98.0% 83.2%
3910447 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.75 38.0 4.76e-01 97.1% 76.9%
3606027 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.74 45.0 5.33e-01 99.0% 86.2%
3108819 10.2.1.11 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gemini_coat 0.73 67.0 6.57e-01 100.0% 91.6%
3272798 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.72 46.0 5.62e-01 99.0% 97.0%
5050550 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 42.0 5.35e-01 97.1% 100.0%
3724772 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 44.0 5.26e-01 99.5% 92.1%
3537625 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.69 49.0 5.59e-01 98.5% 95.5%
3404051 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 49.0 5.61e-01 100.0% 96.8%
3607218 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 44.0 4.61e-01 99.0% 72.4%
4011054 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 41.0 5.14e-01 97.6% 100.0%
5006272 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 45.0 5.01e-01 99.5% 84.8%
3691986 10.32.1.246 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PalB_C 0.66 45.0 5.06e-01 99.0% 89.0%
3444541 11.2.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 0.66 32.0 3.29e-01 95.6% 46.5%
3837828 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.65 39.0 4.64e-01 100.0% 86.7%
4030056 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 44.0 4.99e-01 99.0% 91.0%
3240764 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.64 40.0 4.89e-01 97.6% 96.3%
3825418 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.63 37.0 4.25e-01 99.0% 75.5%
3699612 10.32.1.202 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FAP42_B2 0.63 37.0 4.57e-01 100.0% 90.8%
3876166 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.63 42.0 4.93e-01 98.5% 97.9%
3898740 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.63 40.0 4.80e-01 99.5% 94.2%
3220586 11.1.1.1023 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MATH 0.62 29.0 4.13e-01 95.1% 96.7%
3853746 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.62 44.0 4.97e-01 100.0% 94.8%
3998968 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.62 41.0 4.74e-01 97.6% 93.1%
3873657 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.61 42.0 4.15e-01 100.0% 65.1%
3921479 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.61 43.0 4.21e-01 99.5% 65.9%
3902712 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.61 42.0 4.22e-01 100.0% 69.3%
3817425 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 39.0 4.08e-01 99.0% 68.2%
3830721 207.1.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.60 39.0 2.96e-01 97.6% 26.7%
5009883 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 41.0 4.56e-01 98.5% 87.5%
3831284 207.1.1.465 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_3, LRR_4 0.59 30.0 2.30e-01 100.0% 20.6%
3902916 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.59 46.0 4.27e-01 100.0% 64.3%
4942547 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 44.0 4.58e-01 100.0% 82.1%
4501238 207.1.1.37 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.59 38.0 3.58e-01 99.5% 52.7%
3611967 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 40.0 4.75e-01 97.6% 100.0%
3168473 10.32.1.306 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 0.58 49.0 5.08e-01 99.5% 94.7%
3601261 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 43.0 4.41e-01 99.5% 78.5%
3251650 10.2.1.84 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Seipin 0.57 41.0 4.68e-01 99.0% 97.4%
329362 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.57 42.0 4.65e-01 99.5% 93.9%
3802666 207.1.1.133 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_14 0.57 35.0 2.67e-01 99.5% 25.4%
5051137 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 45.0 4.87e-01 99.0% 98.3%
3611465 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 36.0 4.20e-01 100.0% 90.7%
3438038 11.2.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 0.57 37.0 4.49e-01 80.0% 99.3%
3232875 11.2.1.7 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › Anillin 0.56 37.0 3.61e-01 81.0% 60.0%
4236553 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.56 42.0 4.62e-01 100.0% 94.5%
3915206 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.55 42.0 4.47e-01 99.0% 91.4%
3199216 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.55 41.0 4.49e-01 99.5% 98.1%
3221888 10.32.1.218 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7154 0.55 33.0 4.14e-01 90.7% 99.2%
3493644 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.54 41.0 4.52e-01 98.5% 97.0%
3515983 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.54 40.0 4.04e-01 99.5% 74.3%
3611488 10.32.1.3 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Calpain_III 0.54 45.0 4.64e-01 98.5% 90.5%
3402319 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.54 40.0 3.91e-01 99.5% 70.0%
4099249 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 39.0 4.42e-01 98.5% 98.1%
3333290 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.53 43.0 4.58e-01 99.0% 96.7%
3818089 10.2.1.82 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › C-JID 0.53 38.0 3.76e-01 100.0% 67.7%
3927968 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.53 36.0 4.22e-01 97.6% 99.3%
3898970 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.53 43.0 4.07e-01 99.5% 72.5%
3832339 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 38.0 4.31e-01 81.5% 98.1%
3802129 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.52 37.0 3.17e-01 98.5% 43.5%
3196307 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 36.0 3.67e-01 70.2% 94.0%
3621449 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 33.0 3.92e-01 80.5% 95.0%
3238302 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 40.0 4.31e-01 81.0% 96.0%
5033996 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 47.0 4.45e-01 100.0% 98.0%
3658627 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.50 35.0 4.02e-01 81.5% 96.0%
3478009 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.50 34.0 3.95e-01 79.5% 94.0%