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coat_protein

Euk-Vir

Lake_Sarah-associated_circular_virus-16_Viruses.

coat_protein__YP_009237531__Lake_Sarah-associated_circular_virus-16_Viruses.__X

Identity

Accession:
YP_009237531 ↗
Protein ID:
coat_protein
Kingdom:
euk

Quality

70.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-264
PDB
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6f2sH01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.80 64.0 6.55e-01 100.0% 85.1%
1stmA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.72 45.0 5.48e-01 100.0% 95.0%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.72 36.0 4.79e-01 98.2% 88.0%
1f15B00 2.60.120.530 Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A 0.71 47.0 5.00e-01 100.0% 75.8%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.71 50.0 5.49e-01 100.0% 86.4%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.70 44.0 5.47e-01 100.0% 99.3%
4qpiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.69 50.0 5.03e-01 100.0% 74.2%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.68 41.0 5.16e-01 99.1% 99.2%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 47.0 5.01e-01 100.0% 80.4%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.68 47.0 5.08e-01 100.0% 83.1%
5ewnA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 52.0 5.64e-01 100.0% 94.6%
1opoC01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.67 48.0 5.43e-01 100.0% 96.4%
5hbaA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 39.0 4.98e-01 98.6% 100.0%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 38.0 4.90e-01 99.1% 99.2%
4rs5A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 50.0 5.05e-01 100.0% 80.1%
4d7yA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.64 38.0 4.90e-01 99.1% 99.2%
3jciA00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.64 50.0 5.40e-01 100.0% 94.7%
4qpiC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.64 51.0 4.94e-01 100.0% 74.8%
2okxA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 35.0 3.94e-01 97.3% 68.5%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 51.0 4.71e-01 100.0% 67.4%
1cd3F00 2.60.169.10 Mainly Beta › Sandwich › Bacteriophage G4 Capsid Proteins Gpf, Gpg, Gpj, subunit 1 › Microviridae F protein 0.63 59.0 4.69e-01 100.0% 95.5%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.63 31.0 4.00e-01 96.8% 82.5%
1a6cA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 43.0 4.93e-01 98.6% 92.7%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.63 50.0 5.04e-01 100.0% 83.0%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 48.0 4.79e-01 100.0% 76.5%
6eiwA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 51.0 5.46e-01 100.0% 98.4%
2ws9300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 48.0 4.78e-01 100.0% 77.4%
2w3jA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 37.0 4.64e-01 98.2% 95.6%
6mkbA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 44.0 5.10e-01 99.5% 100.0%
3jb4C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.62 46.0 4.49e-01 100.0% 70.1%
2fd8A01 2.60.120.590 Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.61 31.0 3.32e-01 99.1% 51.8%
1bu8A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.61 26.0 3.64e-01 78.6% 79.2%
1smvC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 49.0 4.97e-01 100.0% 84.7%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 42.0 4.67e-01 98.6% 88.6%
1tme200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 52.0 4.96e-01 100.0% 79.2%
1a8mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.60 40.0 4.75e-01 100.0% 98.0%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 48.0 4.69e-01 100.0% 77.3%
1pgsA02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.59 43.0 4.78e-01 100.0% 93.1%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.59 49.0 4.51e-01 100.0% 68.1%
6lebA02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 36.0 4.36e-01 96.8% 93.5%
3pl0B00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.59 32.0 3.10e-01 100.0% 44.4%
1gnyA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 40.0 4.71e-01 100.0% 99.3%
4qc8A00 2.170.30.10 Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 0.59 55.0 4.16e-01 100.0% 85.9%
3napC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 51.0 4.69e-01 100.0% 73.9%
2c9kA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 38.0 4.34e-01 98.2% 87.8%
8b38A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 5.24e-01 100.0% 94.7%
5mqcC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 47.0 4.49e-01 100.0% 72.7%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 40.0 4.67e-01 99.5% 100.0%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 41.0 4.68e-01 99.5% 97.6%
2woyA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 37.0 4.29e-01 96.8% 92.4%
1dyoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 38.0 4.46e-01 99.5% 97.4%
3ks7A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 4.83e-01 98.6% 100.0%
2zkmX04 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 33.0 4.13e-01 78.6% 98.5%
4icwA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 32.0 4.11e-01 78.6% 99.2%
4c91A04 2.60.120.1620 Mainly Beta › Sandwich › Jelly Rolls › 0.54 39.0 4.16e-01 100.0% 84.1%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 50.0 4.72e-01 100.0% 88.1%
3gf6A00 2.60.120.750 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF3845 0.53 45.0 4.56e-01 100.0% 89.5%
1mec100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 4.51e-01 100.0% 78.8%
2qngA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.52 34.0 3.91e-01 85.9% 87.9%
3l9bA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 30.0 3.84e-01 99.5% 96.8%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 35.0 4.14e-01 100.0% 100.0%
7lyuA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 37.0 3.95e-01 97.7% 83.7%
6kxkG01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.50 30.0 3.81e-01 77.3% 98.5%
3vl9B00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.50 39.0 3.97e-01 97.7% 81.0%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2841541 10.2.1.11 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gemini_coat 0.80 64.0 6.51e-01 100.0% 83.9%
3108819 10.2.1.11 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Gemini_coat 0.76 67.0 6.78e-01 100.0% 93.5%
3390429 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.75 47.0 5.69e-01 97.3% 93.1%
3277376 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 47.0 5.73e-01 100.0% 100.0%
4930609 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.73 41.0 5.08e-01 99.1% 86.4%
3591997 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 37.0 4.73e-01 99.5% 89.2%
3805836 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 38.0 4.81e-01 96.8% 90.4%
3596607 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.67 47.0 5.51e-01 99.1% 100.0%
4944599 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 39.0 4.82e-01 100.0% 93.3%
1868431 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.64 39.0 4.98e-01 98.6% 100.0%
3598492 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 40.0 4.27e-01 97.3% 70.9%
3822933 207.1.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.64 38.0 2.83e-01 96.8% 23.8%
3345756 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.64 39.0 3.59e-01 98.2% 47.3%
1204 10.2.1.69 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.63 50.0 4.59e-01 100.0% 63.2%
3526189 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.63 41.0 4.85e-01 99.5% 94.0%
1191 10.2.1.26 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Phage_F 0.63 59.0 4.69e-01 100.0% 95.8%
1234 10.2.1.7 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Viral_coat 0.63 50.0 5.33e-01 100.0% 94.3%
3374064 207.1.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.63 41.0 2.99e-01 96.4% 25.0%
1216 10.2.1.37 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nepo_coat_C 0.63 43.0 4.93e-01 98.6% 92.7%
3881289 10.3.1.1 beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.62 42.0 4.87e-01 100.0% 93.7%
4631095 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 39.0 4.69e-01 97.7% 92.0%
3832080 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.62 40.0 2.90e-01 96.8% 23.6%
3817425 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 38.0 4.05e-01 96.4% 68.2%
3971638 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 34.0 4.45e-01 91.8% 100.0%
3320260 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 39.0 3.09e-01 96.4% 31.2%
3533957 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.60 40.0 4.83e-01 98.6% 100.0%
3168473 10.32.1.306 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 0.60 49.0 5.24e-01 100.0% 98.4%
3810286 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.60 39.0 4.14e-01 97.7% 72.3%
3251386 11.2.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.60 37.0 4.37e-01 80.5% 88.7%
169772 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.60 48.0 4.69e-01 100.0% 77.3%
4615128 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 39.0 4.59e-01 98.6% 97.3%
3266593 11.2.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.58 37.0 4.18e-01 80.5% 81.8%
5009882 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 38.0 4.56e-01 97.7% 100.0%
3808195 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 38.0 3.30e-01 96.8% 43.0%
3175186 11.2.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.57 35.0 4.31e-01 80.5% 94.4%
4937335 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 40.0 4.49e-01 98.6% 92.4%
5011055 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 45.0 4.93e-01 98.2% 100.0%
3568443 11.2.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.56 37.0 4.37e-01 80.5% 96.0%
5041444 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.56 42.0 4.69e-01 100.0% 97.7%
4542786 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.56 47.0 4.79e-01 100.0% 91.4%
4186200 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.56 41.0 4.62e-01 99.5% 96.0%
3438681 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 35.0 4.32e-01 80.5% 99.3%
3474757 10.32.1.188 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM181_GOLD 0.54 39.0 4.43e-01 96.4% 100.0%
3390097 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.53 36.0 4.15e-01 85.0% 93.1%
3764995 11.2.1.43 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI 0.53 33.0 3.69e-01 85.0% 76.7%
3249011 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.53 32.0 3.95e-01 78.6% 94.3%
3837684 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.53 48.0 4.70e-01 98.2% 99.2%
3920761 11.2.1.43 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI 0.52 33.0 3.75e-01 80.9% 82.4%
5046269 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 40.0 4.37e-01 100.0% 95.6%
3919708 11.2.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.52 35.0 3.84e-01 80.5% 82.2%
3254120 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.52 33.0 3.84e-01 78.6% 88.4%
3276320 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.52 31.0 3.97e-01 79.1% 100.0%
3535563 11.2.1.43 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI 0.52 34.0 3.88e-01 84.5% 86.7%
4027276 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.52 36.0 4.16e-01 80.5% 96.9%
3858383 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.52 32.0 3.92e-01 78.6% 93.8%
3577655 10.40.1.1 beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.52 36.0 4.16e-01 95.0% 98.7%
5029582 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.52 32.0 3.99e-01 78.2% 100.0%
3245055 10.32.1.20 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FBA 0.51 48.0 4.71e-01 100.0% 99.6%
4350552 11.2.1.43 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2+FerI 0.51 30.0 2.66e-01 76.8% 39.4%
3242220 11.2.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.51 35.0 3.94e-01 80.5% 90.9%
3726520 11.2.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.51 35.0 4.01e-01 80.9% 95.0%
3999038 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 35.0 3.99e-01 80.5% 95.0%
3235703 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.50 33.0 3.96e-01 78.2% 97.3%