←Back to structures

coat_protein

Euk-Vir

Lake_Sarah-associated_circular_virus-45_Viruses.

coat_protein__YP_009237597__Lake_Sarah-associated_circular_virus-45_Viruses.__X

Identity

Accession:
YP_009237597 ↗
Protein ID:
coat_protein
Kingdom:
euk

Quality

65.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 160-230_259-286
PDB
Domain cluster: rep: coat_protein__YP_009237535__Lake_Sarah-associated_circular_virus-39_Viruses.__X__D160-283
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 43.0 4.74e-01 99.0% 84.6%
2yjlA00 2.60.40.2990 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 50.0 4.90e-01 99.0% 75.9%
4d7pA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.64 54.0 5.47e-01 100.0% 92.7%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 52.0 4.66e-01 94.9% 96.4%
1m0wA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.60 43.0 4.25e-01 75.8% 85.2%
2hgsA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.60 43.0 4.19e-01 75.8% 86.5%
2r6fA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.59 41.0 4.61e-01 100.0% 98.6%
2z04B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.59 44.0 3.54e-01 77.8% 45.7%
5abxA00 3.30.760.10 Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e 0.59 46.0 3.76e-01 81.8% 70.5%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 39.0 3.85e-01 73.7% 64.2%
2h6uA00 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.57 47.0 4.47e-01 100.0% 75.4%
1uunA01 2.60.40.1650 Mainly Beta › Sandwich › Immunoglobulin-like › Porin MspA (Ig-like beta-sandwich domain) 0.57 50.0 4.56e-01 98.0% 97.7%
3hxiA01 3.30.760.10 Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e 0.57 44.0 3.63e-01 81.8% 73.1%
5utkA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 4.58e-01 99.0% 92.2%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.56 40.0 4.18e-01 87.9% 82.2%
2eddA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 45.0 4.39e-01 99.0% 77.7%
3l5iA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 4.43e-01 98.0% 92.0%
4brvA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.56 48.0 4.47e-01 98.0% 75.8%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 45.0 3.95e-01 89.9% 86.8%
1zldA00 2.60.40.1920 Mainly Beta › Sandwich › Immunoglobulin-like › Proteinaceous host-selective toxin ToxA 0.55 44.0 4.45e-01 88.9% 93.1%
1djxA03 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.55 48.0 4.36e-01 100.0% 71.8%
2fauA01 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 45.0 3.95e-01 90.9% 91.4%
3qt2A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 4.33e-01 100.0% 85.6%
3tesA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 4.34e-01 94.9% 90.4%
1wisA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.38e-01 99.0% 88.1%
4msvA01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.53 41.0 3.71e-01 83.8% 94.9%
2cm5A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 44.0 3.95e-01 92.9% 76.2%
4mkmA01 2.60.40.3930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 47.0 4.14e-01 99.0% 89.7%
1gmiA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 45.0 4.06e-01 100.0% 68.1%
2qngA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.52 47.0 3.97e-01 100.0% 86.1%
2pttB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 46.0 4.55e-01 100.0% 89.8%
4hwxA00 3.30.350.10 Alpha Beta › 2-Layer Sandwich › Subtilisin Inhibitor › Subtilisin inhibitor-like 0.52 39.0 3.74e-01 77.8% 84.2%
2crmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 4.26e-01 91.9% 97.5%
1dg6A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 3.55e-01 83.8% 85.2%
1jz7A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 4.46e-01 97.0% 89.6%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.52 36.0 3.09e-01 72.7% 80.2%
3e1uA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.52 36.0 3.03e-01 73.7% 66.8%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 3.50e-01 84.8% 92.3%
2ba1D01 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.52 47.0 3.53e-01 99.0% 48.3%
3shsA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 46.0 4.28e-01 98.0% 92.7%
2zf8A01 2.60.40.2540 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 44.0 3.91e-01 100.0% 79.9%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 3.45e-01 83.8% 94.3%
1js8B02 2.60.310.10 Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain 0.51 41.0 4.07e-01 98.0% 81.9%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.51 37.0 3.21e-01 76.8% 90.2%
1x5xA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 4.02e-01 89.9% 79.8%
7mjrA04 2.60.40.1790 Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve 0.51 41.0 4.21e-01 91.9% 93.5%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.51 40.0 3.96e-01 98.0% 79.3%
1e3hA01 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.51 44.0 3.38e-01 99.0% 46.0%
2opcA00 2.60.40.2510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 3.89e-01 87.9% 95.7%
2a74A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.51 43.0 4.28e-01 94.9% 94.3%
3qjoA02 2.60.310.10 Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain 0.51 41.0 3.95e-01 98.0% 76.8%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 39.0 3.71e-01 84.8% 74.0%
3unpA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 43.0 3.51e-01 96.0% 82.4%
2petA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 44.0 4.23e-01 100.0% 83.5%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3490050 11.2.1.8 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 0.66 52.0 4.70e-01 100.0% 61.9%
3393565 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.65 49.0 4.37e-01 100.0% 57.0%
3407319 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.60 52.0 4.70e-01 91.9% 87.7%
5037226 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 46.0 4.83e-01 100.0% 88.9%
3504916 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.60 51.0 4.61e-01 91.9% 83.7%
5017116 11.1.1.1403 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1616 0.60 50.0 4.30e-01 90.9% 94.1%
3262232 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 49.0 4.66e-01 90.9% 87.5%
3909420 11.1.1.129 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.59 49.0 4.97e-01 99.0% 92.6%
3601080 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 41.0 4.29e-01 70.7% 100.0%
3176857 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.59 54.0 4.48e-01 100.0% 58.6%
3242603 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.59 49.0 4.48e-01 100.0% 68.5%
3932868 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 52.0 5.06e-01 98.0% 91.8%
3935508 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.58 49.0 4.05e-01 98.0% 51.1%
3483333 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 48.0 4.79e-01 99.0% 87.0%
5036397 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 38.0 4.08e-01 82.8% 77.6%
3479666 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.57 48.0 4.36e-01 91.9% 78.5%
3513020 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 48.0 4.66e-01 92.9% 99.1%
3583059 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 52.0 4.52e-01 99.0% 67.6%
4937646 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 50.0 4.90e-01 100.0% 88.6%
5039097 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 51.0 4.92e-01 100.0% 98.2%
3691924 10.32.1.252 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7371 0.57 48.0 3.90e-01 93.9% 91.3%
3397468 11.1.1.822 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 0.56 47.0 4.62e-01 90.9% 88.6%
4088630 206.1.3.19 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C 0.56 48.0 3.82e-01 97.0% 94.4%
3396597 11.1.1.536 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.56 50.0 4.19e-01 99.0% 85.9%
3411043 11.1.1.536 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.56 50.0 4.35e-01 99.0% 98.7%
3407995 11.1.1.536 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.56 50.0 4.32e-01 99.0% 97.4%
3917104 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.56 47.0 4.23e-01 91.9% 77.1%
3390883 11.1.1.536 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.56 50.0 4.34e-01 99.0% 98.1%
5062273 11.1.1.103 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.56 48.0 4.39e-01 93.9% 96.2%
3408263 11.1.1.822 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 0.55 44.0 4.56e-01 99.0% 91.6%
3721341 10.1.1.103 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF7371 0.55 49.0 3.90e-01 98.0% 94.0%
3818855 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 50.0 4.14e-01 100.0% 65.7%
3400241 11.1.1.536 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.55 49.0 4.26e-01 99.0% 98.7%
3233763 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 4.47e-01 92.9% 89.6%
3200725 10.32.1.252 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF7371 0.55 49.0 3.91e-01 100.0% 98.0%
3410193 11.1.1.536 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.55 48.0 4.20e-01 99.0% 97.4%
3835848 11.1.4.55 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 0.55 41.0 3.91e-01 100.0% 67.2%
4059551 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 48.0 4.28e-01 100.0% 67.9%
3705968 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.55 49.0 4.34e-01 100.0% 68.3%
3361920 11.1.1.236 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.55 48.0 4.71e-01 96.0% 95.2%
3622100 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 48.0 4.24e-01 100.0% 67.6%
3235905 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 48.0 4.34e-01 100.0% 72.3%
4944509 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 44.0 4.56e-01 93.9% 92.6%
4982346 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 4.44e-01 90.9% 96.2%
3406668 11.1.1.536 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 0.54 49.0 4.19e-01 100.0% 92.5%
3795522 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.54 45.0 4.13e-01 93.9% 92.6%
3863141 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 44.0 3.24e-01 91.9% 37.5%
3214114 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 48.0 3.79e-01 99.0% 53.0%
3212466 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 4.20e-01 93.9% 83.3%
3623120 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 43.0 3.81e-01 89.9% 86.7%
3770154 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.53 47.0 4.18e-01 100.0% 68.6%
3884631 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 4.43e-01 99.0% 88.6%
3926171 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 47.0 4.42e-01 100.0% 90.8%
3234635 11.1.4.63 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF870 0.53 43.0 4.12e-01 100.0% 76.5%
1919779 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 4.53e-01 98.0% 94.9%
5030450 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 47.0 4.10e-01 96.0% 75.2%
5022098 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 4.47e-01 89.9% 93.7%
3930324 11.10.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.52 41.0 3.70e-01 84.8% 94.8%
3893718 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.52 40.0 3.53e-01 84.8% 94.2%
4955335 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 4.28e-01 98.0% 90.0%
3903817 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.52 46.0 4.37e-01 99.0% 88.3%
3509447 10.32.1.223 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1 0.52 46.0 3.89e-01 99.0% 98.2%
3620798 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 4.30e-01 91.9% 95.0%
3594262 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 40.0 3.60e-01 83.8% 89.0%
5055931 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 4.44e-01 99.0% 91.8%
1286124 11.1.1.60 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Vps26 0.51 42.0 3.70e-01 90.9% 92.7%
5060187 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.92e-01 79.8% 93.0%
2770105 11.2.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PI3K_C2 0.51 37.0 3.66e-01 83.8% 69.4%
5068017 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 35.0 3.69e-01 91.9% 78.9%
3573566 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 3.95e-01 99.0% 68.9%
3688505 11.1.1.866 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Rha78A_N 0.51 45.0 4.35e-01 99.0% 88.7%
3611709 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 45.0 3.95e-01 100.0% 73.3%
3516879 10.2.1.5 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.50 39.0 3.06e-01 98.0% 36.5%
D2 medium residues 124-159_231-258_287-325_388-469
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yllA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.75 34.0 4.84e-01 92.4% 88.0%
1g43A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.61 35.0 3.81e-01 95.7% 65.0%
4cvuA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 33.0 3.99e-01 91.9% 83.6%
2pn5A08 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.59 34.0 4.26e-01 95.1% 93.7%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 30.0 3.87e-01 93.0% 85.3%
4dzgA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.59 33.0 4.12e-01 91.4% 89.4%
4gaaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.58 28.0 2.84e-01 94.6% 41.5%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.57 36.0 4.34e-01 94.6% 95.8%
1f8vC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 51.0 4.27e-01 95.7% 79.7%
1auyB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 45.0 4.46e-01 95.1% 79.9%
4rft000 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 45.0 4.81e-01 95.1% 95.1%
4nwvA01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 4.72e-01 95.1% 88.0%
1stmA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.56 40.0 4.50e-01 95.1% 95.7%
1e57B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 44.0 4.43e-01 95.1% 82.5%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.56 50.0 4.22e-01 95.1% 90.2%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.55 32.0 3.86e-01 92.4% 87.2%
1novA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 50.0 4.15e-01 95.7% 79.0%
2df7A02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.55 40.0 4.52e-01 95.1% 98.6%
2waaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 35.0 4.16e-01 93.5% 94.3%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.54 36.0 3.19e-01 96.2% 47.5%
4dxzA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.54 30.0 3.80e-01 91.4% 90.1%
1df0A03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.54 38.0 4.46e-01 90.8% 100.0%
1fmd200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 4.17e-01 96.2% 72.9%
5j09A00 2.60.120.950 Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein 0.53 45.0 4.73e-01 94.6% 98.8%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.53 34.0 4.09e-01 90.3% 100.0%
3gqcC04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.53 34.0 4.13e-01 95.1% 100.0%
6sk6A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.08e-01 95.1% 69.2%
4kkpA01 2.60.40.3880 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 30.0 3.62e-01 95.1% 84.2%
1ng0C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.41e-01 95.1% 83.5%
1b35A00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.14e-01 95.1% 78.1%
2ws9201 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 4.40e-01 96.2% 85.6%
6f2sH01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.35e-01 94.6% 85.1%
5j98B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 46.0 4.08e-01 95.1% 75.8%
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.99e-01 95.1% 68.4%
5mqcB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 4.07e-01 95.1% 73.2%
2x29A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.51 39.0 4.25e-01 95.7% 94.9%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 34.0 3.83e-01 92.4% 86.3%
8b38A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 4.14e-01 94.1% 95.1%
1wcdJ01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 46.0 3.95e-01 97.3% 75.8%
1tme300 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 45.0 4.16e-01 95.1% 77.8%
3cjiB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 4.09e-01 95.1% 78.6%
5k0uB00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 44.0 4.11e-01 95.1% 76.6%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 4.08e-01 95.1% 77.7%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3396112 10.32.1.235 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MBF2 0.66 34.0 4.42e-01 91.9% 89.0%
3236803 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.66 38.0 4.95e-01 91.9% 100.0%
4462900 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.65 38.0 4.86e-01 95.1% 98.2%
5058946 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 35.0 4.54e-01 92.4% 100.0%
3473996 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.61 55.0 4.73e-01 96.2% 91.8%
3607284 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 39.0 4.53e-01 90.8% 93.8%
150670 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 33.0 4.10e-01 90.8% 88.6%
4415823 10.32.1.246 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PalB_C 0.58 39.0 4.54e-01 92.4% 93.3%
4958335 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 34.0 3.61e-01 95.1% 63.6%
3215810 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 36.0 4.19e-01 92.4% 85.2%
3786014 10.32.1.237 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Mid1 0.58 42.0 4.73e-01 90.8% 97.9%
5040908 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.58 38.0 4.39e-01 95.7% 93.1%
3275307 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.57 35.0 4.37e-01 90.3% 98.3%
3523714 10.4.1.23 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 0.56 33.0 4.00e-01 93.5% 89.2%
4947556 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 32.0 3.56e-01 91.4% 69.3%
5061301 11.1.1.103 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.55 37.0 3.36e-01 90.3% 50.8%
4939155 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.55 33.0 3.95e-01 95.7% 89.9%
4937727 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 34.0 4.22e-01 94.1% 100.0%
3277038 10.20.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.54 33.0 3.53e-01 97.3% 68.1%
1713715 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.54 48.0 4.13e-01 95.1% 64.2%
3722331 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 45.0 4.70e-01 91.4% 94.3%
2862065 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.54 43.0 4.43e-01 94.1% 88.0%
5036963 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 34.0 4.09e-01 95.1% 100.0%
3597772 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 46.0 4.51e-01 90.8% 87.7%
3511452 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.53 35.0 4.09e-01 95.7% 96.8%
1886797 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.53 47.0 4.21e-01 95.1% 73.5%
296002 10.2.1.15 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Tymo_coat 0.53 42.0 4.20e-01 94.1% 81.0%
3265495 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 35.0 3.31e-01 91.9% 56.7%
152483 10.2.1.1 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.52 46.0 4.03e-01 95.1% 64.6%
3418391 302.1.1.1 ↗ a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.52 34.0 4.04e-01 95.7% 96.8%
5047105 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 38.0 4.26e-01 92.4% 99.3%
3908517 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.52 32.0 3.94e-01 91.9% 99.1%
1204 10.2.1.69 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv_5 0.52 46.0 3.97e-01 95.7% 63.5%
3597620 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 37.0 4.05e-01 92.4% 90.7%
D3 medium residues 326-387
PDB
Domain cluster: representative