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coat_protein
Euk-VirMaize-associated_totivirus_3
coat_protein__YP_009448195__Maize-associated_totivirus_3__2057198
Identity
- Accession:
- YP_009448195 ↗
- Protein ID:
- coat_protein
- Kingdom:
- euk
Quality
69.7
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Chrymotiviricetes›
Ghabrivirales›
Orthototiviridae›
Maize-associated_totivirus_3
TaxID: 2057198
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 117-431
Domain cluster:
rep: hypothetical_protein_1__YP_009342433__Wuhan_insect_virus_27__1923731__D54-438
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09220.17 best | LA-virus_coat | 417.7 | 5.60e-125 | 100.0% | 72.4% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m1cA00 | 3.90.1840.10 | Alpha Beta › Alpha-Beta Complex › Major capsid protein › Major capsid protein | 0.87 | 85.0 | 6.43e-01 | 100.0% | 48.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7654 | 4065.1.1.1 ↗ | a+b complex topology › L-A virus major coat protein-related › L-A virus major coat protein-related › L-A virus major coat protein-related › LA-virus_coat | 0.87 | 85.0 | 6.43e-01 | 100.0% | 48.4% |
| 4821589 | 4065.1.1.1 ↗ | a+b complex topology › L-A virus major coat protein-related › L-A virus major coat protein-related › L-A virus major coat protein-related › LA-virus_coat | 0.79 | 75.0 | 6.80e-01 | 100.0% | 76.5% |
| 3743594 | 4065.1.1.1 ↗ | a+b complex topology › L-A virus major coat protein-related › L-A virus major coat protein-related › L-A virus major coat protein-related › LA-virus_coat | 0.76 | 53.0 | 4.95e-01 | 100.0% | 57.9% |
D2
high
residues 461-541
D3
medium
residues 576-674