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coat_protein

Euk-Vir

Colletotrichum_gloeosporioides_chrysovirus_1

coat_protein__YP_009667014__Colletotrichum_gloeosporioides_chrysovirus_1__1766766

Identity

Accession:
YP_009667014 ↗
Protein ID:
coat_protein
Kingdom:
euk

Quality

58.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 76-116_373-427_432-523
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF21685.4 best Fungal_virus_P2_N 99.0 3.50e-28 44.7% 23.8%
PF21685.4 Fungal_virus_P2_N 27.1 2.40e-06 16.0% 7.9%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6x3aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 26.0 3.38e-01 100.0% 62.5%
1vwxS01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.62 23.0 3.72e-01 96.8% 88.7%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.59 19.0 3.30e-01 98.4% 88.3%
4a18X01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.58 25.0 3.78e-01 100.0% 94.9%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.53 24.0 2.87e-01 100.0% 60.2%
3fzzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 25.0 3.01e-01 100.0% 65.8%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1291942 4065.1.1.2 a+b complex topology › L-A virus major coat protein-related › L-A virus major coat protein-related › L-A virus major coat protein-related › Fungal_virus_P2_N 0.75 72.0 5.09e-01 100.0% 81.5%
5033281 304.100.1.1 a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS 0.62 24.0 3.90e-01 97.3% 98.5%
4237265 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 26.0 3.30e-01 100.0% 62.7%
3732370 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.58 21.0 3.50e-01 96.3% 96.7%
3513270 11.1.1.239 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG3 0.54 23.0 3.16e-01 100.0% 76.8%
3992476 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.53 27.0 3.12e-01 100.0% 63.4%
3595503 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.51 36.0 3.96e-01 72.3% 95.5%
3901156 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 24.0 2.90e-01 100.0% 66.1%
D2 medium residues 117-185_334-359_361-372
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF21685.4 best Fungal_virus_P2_N 62.4 4.60e-17 65.4% 18.6%
PF21685.4 Fungal_virus_P2_N 27.5 1.80e-06 36.4% 10.4%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qhhD01 3.30.160.800 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 27.0 3.12e-01 72.9% 64.5%