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conserved_putative_CDS-capping_enzyme
Euk-VirMelbournevirus
conserved_putative_CDS-capping_enzyme__YP_009094783__Melbournevirus__1560514
Identity
- Accession:
- YP_009094783 ↗
- Protein ID:
- conserved_putative_CDS-capping_enzyme
- Kingdom:
- euk
Quality
72.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Marseillevirus_sp._'Melbournevirus'
TaxID: 1560514
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 443-545
Domain cluster:
rep: mRNA_guanylyltransferase__NP_048451__Paramecium_bursaria_Chlorella_virus_1__10506__D242-316
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03919.22 best | mRNA_cap_C | 34.7 | 3.80e-08 | 98.1% | 89.6% |
D2
medium
residues 1-45_108-138_200-213
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xcjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 38.0 | 2.93e-01 | 73.3% | 84.7% |
| 6jp6D01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 43.0 | 3.24e-01 | 84.4% | 89.7% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.54 | 46.0 | 3.10e-01 | 92.2% | 72.1% |
| 2kinA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.53 | 37.0 | 2.80e-01 | 73.3% | 50.4% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 35.0 | 3.96e-01 | 70.0% | 94.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3739752 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 44.0 | 3.05e-01 | 92.2% | 59.0% |
| 4126991 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 34.0 | 3.42e-01 | 75.6% | 64.4% |
| 3883408 | 304.151.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › EPCAM-Trop-2_C | 0.51 | 35.0 | 3.08e-01 | 70.0% | 82.4% |
| 4419829 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.51 | 35.0 | 3.81e-01 | 71.1% | 94.7% |
D3
medium
residues 46-107_139-199
D4
medium
residues 214-249_270-363
D5
medium
residues 250-269_364-438
D6
medium
residues 546-691_747-771
Domain cluster:
rep: IMGVR_UViG_3300005095_000540-3300005095-Ga0072504_10167229__D19-209
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03291.23 best | mRNA_G-N7_MeTrfase | 39.7 | 4.60e-10 | 91.2% | 44.8% |
D7
medium
residues 692-746_772-794