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conserved_putative_CDS-capping_enzyme

Euk-Vir

Melbournevirus

conserved_putative_CDS-capping_enzyme__YP_009094783__Melbournevirus__1560514

Identity

Accession:
YP_009094783 ↗
Protein ID:
conserved_putative_CDS-capping_enzyme
Kingdom:
euk

Quality

72.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 443-545
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03919.22 best mRNA_cap_C 34.7 3.80e-08 98.1% 89.6%
D2 medium residues 1-45_108-138_200-213
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xcjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 38.0 2.93e-01 73.3% 84.7%
6jp6D01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 43.0 3.24e-01 84.4% 89.7%
3ttgA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.54 46.0 3.10e-01 92.2% 72.1%
2kinA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.53 37.0 2.80e-01 73.3% 50.4%
1cc8A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 35.0 3.96e-01 70.0% 94.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3739752 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 44.0 3.05e-01 92.2% 59.0%
4126991 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.53 34.0 3.42e-01 75.6% 64.4%
3883408 304.151.1.2 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › EPCAM-Trop-2_C 0.51 35.0 3.08e-01 70.0% 82.4%
4419829 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.51 35.0 3.81e-01 71.1% 94.7%
D4 medium residues 214-249_270-363
PDB
D5 medium residues 250-269_364-438
PDB
D6 medium residues 546-691_747-771
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03291.23 best mRNA_G-N7_MeTrfase 39.7 4.60e-10 91.2% 44.8%
D7 medium residues 692-746_772-794
PDB