←Back to structures

conserved_putative_membrane_protein

Euk-Vir

Lausannevirus

conserved_putative_membrane_protein__YP_004347256__Lausannevirus__999883

Identity

Accession:
YP_004347256 ↗
Protein ID:
conserved_putative_membrane_protein
Kingdom:
euk

Quality

62.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Losannavirus› Lausannevirus

TaxID: 999883

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 100-184
PDB
Domain cluster: rep: hypothetical_protein_D1R32_gp206__YP_009506968__Tunisvirus_fontaine2__1421067__D90-177
D2 medium residues 311-370
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19175.6 best DUF5857 36.9 3.80e-09 100.0% 21.6%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lycA00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 41.0 2.78e-01 91.7% 16.6%
1ee6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.58 44.0 3.12e-01 90.0% 25.9%
4i84A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.57 43.0 2.86e-01 100.0% 17.9%
1dihA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 42.0 3.60e-01 91.7% 74.1%
1hkvA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.53 43.0 2.97e-01 100.0% 34.5%
1rwrA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.52 41.0 2.72e-01 93.3% 31.3%
2xz8A00 3.40.80.10 Alpha Beta › 3-Layer(aba) Sandwich › Lysozyme-like › Peptidoglycan recognition protein-like 0.51 36.0 2.82e-01 75.0% 83.7%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4321639 207.8.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.69 58.0 3.52e-01 100.0% 14.1%
3979669 207.8.1.2 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N 0.66 54.0 3.25e-01 100.0% 12.4%
4567319 207.8.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.64 52.0 3.19e-01 100.0% 13.3%
3870521 207.14.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.63 52.0 4.93e-01 100.0% 78.7%
3715374 207.14.1.2 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DGF-1_beta-sheet 0.61 44.0 3.75e-01 100.0% 44.8%
3252580 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.61 46.0 2.90e-01 98.3% 14.4%
4818375 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.60 48.0 3.99e-01 98.3% 46.3%
2526446 1160.1.1.1 ↗ beta duplicates or obligate multimers › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › Endoglin orphan region (OR) domain › TGFBR3_N 0.59 44.0 3.31e-01 93.3% 29.4%
3798316 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.58 49.0 3.05e-01 100.0% 18.7%
1109400 207.2.1.15 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS 0.57 43.0 2.86e-01 100.0% 17.9%
2485695 207.15.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › beta-helix of amnionless (AMN) extracellular domain › beta-helix of amnionless (AMN) extracellular domain › Amnionless 0.54 36.0 3.21e-01 90.0% 46.2%
3714749 207.2.1.56 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DGF-1_N 0.54 46.0 2.74e-01 100.0% 13.9%
3705677 207.2.1.52 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.53 45.0 2.71e-01 100.0% 11.9%
4931622 207.2.1.22 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.53 44.0 2.84e-01 100.0% 29.1%
3189468 2007.1.4.2 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat 0.53 42.0 3.20e-01 91.7% 70.0%
4942054 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.53 43.0 2.82e-01 100.0% 25.8%
4969460 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.53 37.0 2.80e-01 93.3% 26.1%
3263728 207.2.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.52 45.0 3.08e-01 100.0% 30.6%
7226 207.2.1.15 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS 0.52 41.0 2.72e-01 93.3% 31.3%
3945380 207.14.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.50 31.0 2.74e-01 98.3% 37.0%