control_protein_E1B_55K

Euk-Vir

Human_mastadenovirus_F

control_protein_E1B_55K__NP_040850__Human_mastadenovirus_F__130309

Identity

78.8 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Human_mastadenovirus_F

TaxID: 130309

View cluster (36 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 117-203

PDB

Domain cluster: rep: E1B_55K__YP_006272951__Chimpanzee_adenovirus_Y25__1123958__D147-207_228-245

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01696.24 best	Adeno_E1B_55K	119.5	2.00e-34	100.0%	22.5%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1qp8A02	3.40.50.720	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain	0.55	40.0	3.26e-01	79.3%	59.1%
3vv3A00	3.40.50.200	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain	0.54	43.0	2.98e-01	89.7%	59.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3715374	207.14.1.2 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DGF-1_beta-sheet	0.52	41.0	3.93e-01	96.6%	72.4%

D2 medium residues 204-275

PDB

Domain cluster: rep: control_protein_E1B_55_kDa__YP_009109570__Simian_adenovirus_DM-2014__1560346__D234-315

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01696.24 best	Adeno_E1B_55K	91.9	5.00e-26	100.0%	18.9%

D3 medium residues 276-470

PDB

Domain cluster: rep: E1B_55K__YP_009174142__Simian_adenovirus_16__1715778__D309-480

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01696.24 best	Adeno_E1B_55K	288.8	7.80e-86	100.0%	51.9%