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cysteine_motif_gene-d9.3
Euk-VirIchnoviriform_fugitivi
cysteine_motif_gene-d9.3__YP_001031334__Ichnoviriform_fugitivi__265522
Identity
- Accession:
- YP_001031334 ↗
- Protein ID:
- cysteine_motif_gene-d9.3
- Kingdom:
- euk
Quality
52.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-132
Domain cluster:
rep: cysteine_motif_gene-c4.1__YP_001031276__Ichnoviriform_fugitivi__265522__D27-109
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08008.19 best | Viral_cys_rich | 112.3 | 1.20e-32 | 72.1% | 97.4% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iejA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 32.0 | 3.56e-01 | 76.0% | 86.7% |
| 2rfbA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 42.0 | 3.03e-01 | 94.2% | 79.3% |
| 2khvA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.50 | 35.0 | 3.75e-01 | 82.7% | 88.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4137678 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 30.0 | 3.72e-01 | 89.4% | 95.0% |
| 3938534 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 45.0 | 3.27e-01 | 99.0% | 37.1% |
| 5056059 | 309.1.1.15 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › DEAD_assoc | 0.51 | 43.0 | 3.85e-01 | 96.2% | 91.9% |
| 3940056 | 7575.1.1.1 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C14 | 0.51 | 40.0 | 3.08e-01 | 85.6% | 88.0% |