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cysteine_protease_C-prot
Euk-VirCitrus_leprosis_virus_C
cysteine_protease_C-prot__YP_654566__Citrus_leprosis_virus_C__347219
Identity
- Accession:
- YP_654566 ↗
- Protein ID:
- cysteine_protease_C-prot
- Kingdom:
- euk
Quality
75.1
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Kitaviridae›
Cilevirus›
Citrus_leprosis_virus_C
TaxID: 347219
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-108
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3phuA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.72 | 63.0 | 4.54e-01 | 100.0% | 39.0% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.71 | 63.0 | 4.59e-01 | 100.0% | 38.7% |
| 5jzeA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.68 | 59.0 | 4.30e-01 | 100.0% | 39.0% |
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.66 | 56.0 | 4.04e-01 | 100.0% | 45.0% |
| 3by4A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.65 | 55.0 | 4.00e-01 | 100.0% | 33.7% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.64 | 43.0 | 3.51e-01 | 92.7% | 34.8% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 49.0 | 4.50e-01 | 96.4% | 83.1% |
| 4ywoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 45.0 | 3.08e-01 | 85.5% | 81.1% |
| 2p62A02 | 1.10.3490.10 | Mainly Alpha › Orthogonal Bundle › PH0156-like › PH0156-like | 0.58 | 43.0 | 3.72e-01 | 92.7% | 49.5% |
| 4jocA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.57 | 47.0 | 2.95e-01 | 100.0% | 20.8% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 3.10e-01 | 78.2% | 36.8% |
| 2xauA04 | 1.10.10.2130 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DEAH helicase family, winged-helix domain | 0.54 | 33.0 | 3.52e-01 | 94.5% | 70.2% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 36.0 | 2.85e-01 | 76.4% | 32.5% |
| 1rzsA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 39.0 | 3.86e-01 | 87.3% | 80.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3855063 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.70 | 61.0 | 4.18e-01 | 100.0% | 30.1% |
| 3944738 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.60 | 47.0 | 4.42e-01 | 94.5% | 84.0% |
| 5003089 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.58 | 45.0 | 4.28e-01 | 90.9% | 84.3% |
| 4869547 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.57 | 44.0 | 4.28e-01 | 94.5% | 85.1% |
| 3836397 | 101.1.1.138 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD | 0.52 | 36.0 | 3.23e-01 | 85.5% | 49.4% |