←Back to structures

cytochrome_P450_family_protein

Euk-Vir

Acanthamoeba_polyphaga_moumouvirus

cytochrome_P450_family_protein__YP_007354533__Acanthamoeba_polyphaga_moumouvirus__1269028

Identity

Accession:
YP_007354533 ↗
Protein ID:
cytochrome_P450_family_protein
Kingdom:
euk

Quality

70.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Imitervirales› Mimiviridae› Moumouvirus› Acanthamoeba_polyphaga_moumouvirus

TaxID: 1269028

Cluster

View cluster (13 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-52
PDB
D2 medium residues 53-115_316-458
PDB
D3 medium residues 116-186
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.73 51.0 4.92e-01 76.1% 65.8%
1ad6A00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 51.0 3.88e-01 84.5% 53.5%
1mswD01 1.10.1320.10 Mainly Alpha › Orthogonal Bundle › T7 RNA polymerase; domain 1 › DNA-directed RNA polymerase, N-terminal domain 0.63 51.0 3.33e-01 87.3% 56.1%
2ajrA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.62 48.0 3.28e-01 85.9% 22.6%
2g3bA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 47.0 3.54e-01 83.1% 42.2%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 39.0 3.90e-01 76.1% 66.7%
3nbxX03 1.20.58.1510 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 39.0 3.56e-01 71.8% 61.4%
2n1rA00 1.10.150.90 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 0.57 41.0 3.40e-01 76.1% 77.6%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 38.0 2.82e-01 76.1% 28.0%
3b9qA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.54 43.0 4.01e-01 88.7% 96.6%
1r6bX03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.51 39.0 3.69e-01 85.9% 79.5%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3821436 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.80 72.0 4.69e-01 100.0% 27.5%
4947330 140.1.1.11 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 0.78 53.0 3.80e-01 70.4% 38.5%
4022444 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.77 69.0 4.53e-01 100.0% 27.9%
3418471 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.76 68.0 4.31e-01 100.0% 21.8%
3728512 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.75 67.0 4.44e-01 100.0% 27.6%
3246888 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.75 67.0 4.41e-01 100.0% 27.6%
169819 2006.1.1.44 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.75 49.0 3.32e-01 71.8% 19.2%
2430575 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.74 64.0 4.81e-01 95.8% 44.3%
3419760 150.7.1.3 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE › CGLD27-like 0.72 50.0 4.71e-01 71.8% 65.9%
3628162 5073.1.1.0 ↗ alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M 0.71 63.0 3.84e-01 100.0% 77.8%
3937415 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.68 57.0 4.38e-01 93.0% 74.4%
3478615 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.67 56.0 3.65e-01 91.5% 73.6%
4982562 3542.1.1.0 ↗ alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases 0.65 47.0 3.22e-01 77.5% 23.0%
3897328 2003.1.5.111 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Rsm22 0.64 52.0 3.37e-01 90.1% 65.7%
3645555 3817.1.1.1 ↗ alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 0.64 53.0 4.51e-01 94.4% 83.7%
3786419 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 46.0 4.25e-01 81.7% 61.1%
3279834 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.63 52.0 4.12e-01 88.7% 79.3%
3723918 7579.1.1.36 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.60 46.0 2.95e-01 84.5% 81.7%
3973396 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.59 42.0 3.93e-01 80.3% 57.9%
3391578 101.1.1.313 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF29968 0.59 45.0 3.68e-01 85.9% 92.4%
5047915 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.56 40.0 2.88e-01 74.6% 67.0%
4055608 3826.1.1.21 ↗ alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF986 0.56 38.0 3.72e-01 73.2% 65.3%
None — 0.55 41.0 2.88e-01 80.3% 23.0%
4023514 244.1.1.9 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GMC_oxred_C 0.55 45.0 3.35e-01 97.2% 94.0%
5010916 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.54 43.0 3.51e-01 85.9% 58.5%
3738845 5071.1.1.1 ↗ alpha bundles › cytochrome bc1 complex 11 kDa protein-like › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › UCR_hinge 0.54 39.0 3.89e-01 85.9% 74.3%
3840124 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.52 41.0 3.46e-01 87.3% 70.4%