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dbp-1
Euk-VirHemileuca_sp._nucleopolyhedrovirus
dbp-1__YP_008378235__Hemileuca_sp._nucleopolyhedrovirus__1367203
Identity
- Accession:
- YP_008378235 ↗
- Protein ID:
- dbp-1
- Kingdom:
- euk
Quality
79.8
mean pLDDT
Taxonomy
TaxID: 1367203
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-268
Domain cluster:
rep: ssDNA_binding_protein__YP_009118586__Condylorrhiza_vestigialis_MNPV__1592576__D101-219_236-303
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04786.19 best | Baculo_DNA_bind | 189.3 | 1.20e-55 | 100.0% | 99.6% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h2cA00 | 2.70.20.20 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain | 0.55 | 23.0 | 3.14e-01 | 73.0% | 73.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953814 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.78 | 15.0 | 3.54e-01 | 78.2% | 73.3% |
| 4316065 | 243.3.1.15 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Imm35 | 0.70 | 18.0 | 3.22e-01 | 79.8% | 67.1% |
| 5014688 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 13.0 | 3.04e-01 | 78.6% | 74.5% |
| 4265972 | 2.3.1.2 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NTR | 0.60 | 30.0 | 3.62e-01 | 89.9% | 69.1% |
| 5061447 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 30.0 | 4.01e-01 | 84.7% | 100.0% |
| 4014424 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 23.0 | 3.32e-01 | 72.2% | 82.6% |