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dbp
Euk-VirClostera_anachoreta_granulovirus
dbp__YP_004376274__Clostera_anachoreta_granulovirus__283675
Identity
- Accession:
- YP_004376274 ↗
- Protein ID:
- dbp
- Kingdom:
- euk
Quality
87.0
mean pLDDT
Taxonomy
TaxID: 283675
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-275
Domain cluster:
rep: ssDNA_binding_protein__YP_009118586__Condylorrhiza_vestigialis_MNPV__1592576__D101-219_236-303
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04786.19 best | Baculo_DNA_bind | 221.8 | 1.30e-65 | 100.0% | 99.6% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xvsA00 | 2.40.50.550 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 32.0 | 3.82e-01 | 100.0% | 75.9% |
| 1tr8A01 | 2.20.70.30 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain | 0.58 | 13.0 | 2.78e-01 | 85.8% | 82.7% |
| 2dn7A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 17.0 | 2.59e-01 | 73.2% | 58.9% |
| 1h2cA00 | 2.70.20.20 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain | 0.56 | 22.0 | 3.13e-01 | 77.2% | 73.4% |
| 2i46A00 | 2.40.50.960 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 29.0 | 3.66e-01 | 100.0% | 82.2% |
| 1qg3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 18.0 | 2.76e-01 | 74.8% | 69.2% |
| 4da5A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 16.0 | 2.83e-01 | 82.3% | 78.3% |
| 1xjvA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 28.0 | 3.62e-01 | 84.6% | 86.6% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 22.0 | 3.50e-01 | 74.8% | 100.0% |
| 4csbA00 | 2.40.128.480 | Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein | 0.51 | 21.0 | 3.14e-01 | 85.4% | 86.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3556847 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 18.0 | 2.75e-01 | 75.2% | 58.2% |
| 3908608 | 6070.1.1.2 ↗ | few secondary structure elements › Sortilin C-terminal domain › Sortilin C-terminal domain › Sortilin C-terminal domain › ELAPOR1_C | 0.58 | 12.0 | 3.06e-01 | 77.6% | 92.0% |
| 3254983 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.53 | 24.0 | 3.27e-01 | 79.5% | 81.6% |
| 3990559 | 11.1.1.957 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_6th | 0.51 | 17.0 | 2.22e-01 | 74.0% | 46.7% |
| 3869565 | 11.1.1.794 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LIFR_D4 | 0.51 | 17.0 | 2.72e-01 | 74.8% | 72.4% |