dbp

Euk-Vir

Equine_adenovirus_2

dbp__YP_009162359__Equine_adenovirus_2__67603

Identity

80.7 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Equine_adenovirus_2

TaxID: 67603

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 91-153

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02236.24 best	Viral_DNA_bi	71.2	1.10e-19	98.4%	72.2%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2y1vA04	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.56	40.0	2.90e-01	74.6%	69.7%
2bskB00	1.10.287.810	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains	0.53	37.0	3.68e-01	71.4%	98.5%
1kxpD03	1.10.246.10	Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 ›	0.52	43.0	3.95e-01	95.2%	89.8%
5xe7A01	1.20.140.160	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain	0.52	42.0	3.40e-01	96.8%	93.0%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3537259	144.1.1.1 ↗	alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1	0.63	44.0	4.16e-01	92.1%	60.0%
4926955	6049.1.1.0 ↗	alpha bundles › PH0832-like › PH0832-like › PH0832-like	0.62	47.0	4.07e-01	82.5%	80.0%
3218555	5054.1.1.0 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels	0.61	42.0	3.15e-01	77.8%	30.0%
5001331	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.59	41.0	3.47e-01	74.6%	90.4%
4934796	6049.1.1.0 ↗	alpha bundles › PH0832-like › PH0832-like › PH0832-like	0.59	45.0	4.03e-01	82.5%	84.4%
3712208	2484.8.1.0 ↗	mixed a+b and a/b › Ribonuclease H-like › Separase pseudo-protease domain (PPD) › Separase pseudo-protease domain (PPD)	0.57	49.0	3.21e-01	98.4%	47.0%
3487367	10.12.1.51 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_2	0.57	44.0	2.80e-01	82.5%	36.3%
3415030	101.1.1.112 ↗	alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg	0.57	40.0	3.43e-01	84.1%	46.0%
3909404	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.56	48.0	4.06e-01	96.8%	76.2%
4488279	109.4.1.295 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COP9_hel_rpt	0.54	48.0	3.02e-01	100.0%	39.1%

D2 medium residues 154-201_259-270

PDB

Domain cluster: representative

D3 medium residues 202-258

PDB

Domain cluster: rep: DBP__YP_007347008__Bovine_adenovirus_6__111167__D124-183

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03728.19 best	Viral_DNA_Zn_bi	33.6	6.50e-08	100.0%	52.0%

D4 medium residues 271-405

PDB

Domain cluster: rep: DBP__YP_009162599__Skunk_adenovirus_PB1__1641642__D183-206_246-418

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03728.19 best	Viral_DNA_Zn_bi	76.6	2.70e-21	71.1%	96.9%