dbp

Euk-Vir

Cryptophlebia_peltastica_nucleopolyhedrovirus

dbp__YP_010086885__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025

Identity

83.9 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Cryptophlebia_peltastica_nucleopolyhedrovirus

TaxID: 2304025

View cluster (24 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-302

PDB

Domain cluster: rep: ssDNA_binding_protein__YP_009118586__Condylorrhiza_vestigialis_MNPV__1592576__D101-219_236-303

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04786.19 best	Baculo_DNA_bind	315.8	2.70e-94	100.0%	99.6%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1h2cA00	2.70.20.20	Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain	0.56	23.0	3.18e-01	74.3%	73.4%
3gw6A03	3.30.2460.10	Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Endo-n-acetylneuraminidase domain	0.55	13.0	2.57e-01	93.2%	73.7%
1se8A02	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.55	26.0	3.76e-01	77.1%	98.2%
4csbA00	2.40.128.480	Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein	0.51	22.0	3.20e-01	84.3%	86.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5012513	2.1.1.15 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon	0.60	30.0	3.90e-01	85.1%	83.7%
3587268	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.59	30.0	4.18e-01	74.7%	100.0%
3493999	59.1.3.0 ↗	beta complex topology › triple barrel › triple barrel › RNA polymerase I subunits A49/A34.5 dimerization domains	0.55	19.0	2.97e-01	97.6%	75.8%