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decapping_enzyme
Euk-VirCotia_virus_SPAn232
decapping_enzyme__YP_005296292__Cotia_virus_SPAn232__930275
Identity
- Accession:
- YP_005296292 ↗
- Protein ID:
- decapping_enzyme
- Kingdom:
- euk
Quality
92.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Oryzopoxvirus›
Cotia_virus_SPAn232
TaxID: 930275
Cluster
View cluster (31 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-62_124-184_200-215
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00293.35 best | NUDIX | 27.4 | 4.20e-06 | 69.8% | 26.1% |
| PF08476.16 | VD10_N | 29.3 | 7.70e-07 | 18.5% | 46.5% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cfjA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.86 | 65.0 | 6.14e-01 | 78.2% | 87.1% |
| 1ktgA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.85 | 65.0 | 6.13e-01 | 79.0% | 87.6% |
| 2kdvA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.81 | 60.0 | 5.39e-01 | 78.2% | 84.8% |
| 3hhjB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.80 | 61.0 | 5.89e-01 | 78.2% | 91.6% |
| 2fmlA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.80 | 61.0 | 5.38e-01 | 79.0% | 92.1% |
| 4hfqA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.78 | 60.0 | 5.64e-01 | 79.0% | 84.9% |
| 1ryaA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.78 | 59.0 | 5.32e-01 | 79.0% | 80.0% |
| 3edsA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.76 | 58.0 | 5.55e-01 | 78.2% | 79.7% |
| 2b06A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.75 | 57.0 | 5.20e-01 | 78.2% | 76.0% |
| 3o8sA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.75 | 57.0 | 5.49e-01 | 79.0% | 85.1% |
| 5anvA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.75 | 57.0 | 5.18e-01 | 79.0% | 76.5% |
| 1vk6A02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.74 | 56.0 | 5.43e-01 | 79.0% | 84.7% |
| 1nqzA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.73 | 65.0 | 5.68e-01 | 94.1% | 89.5% |
| 4jzsA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.72 | 66.0 | 5.99e-01 | 100.0% | 88.6% |
| 2azwA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.65 | 60.0 | 5.59e-01 | 100.0% | 88.4% |
| 7z7vC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.57 | 33.0 | 3.26e-01 | 95.0% | 52.8% |
| 1op4A01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 25.0 | 2.95e-01 | 79.8% | 62.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1124600 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.88 | 66.0 | 6.14e-01 | 77.3% | 86.6% |
| 4951993 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.84 | 63.0 | 5.90e-01 | 78.2% | 82.5% |
| 4965094 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.83 | 61.0 | 5.77e-01 | 76.5% | 82.9% |
| 4990890 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.82 | 69.0 | 6.12e-01 | 87.4% | 91.8% |
| 3609576 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.72 | 68.0 | 5.37e-01 | 100.0% | 87.1% |
| 6242 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.65 | 60.0 | 5.59e-01 | 100.0% | 88.4% |
| 3244616 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.56 | 49.0 | 3.54e-01 | 95.0% | 82.4% |
D2
medium
residues 63-123
Domain cluster:
rep: mRNA-decapping_protein_D10__YP_009329720__BeAn_58058_virus__67082__D65-123