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deoxynucleotide_monophosphate_-dNMP-_kinase
Euk-VirSalmon_gill_poxvirus
deoxynucleotide_monophosphate_-dNMP-_kinase__YP_009162466__Salmon_gill_poxvirus__1680908
Identity
- Accession:
- YP_009162466 ↗
- Protein ID:
- deoxynucleotide_monophosphate_-dNMP-_kinase
- Kingdom:
- euk
Quality
80.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Salmonpoxvirus›
Salmon_gill_poxvirus
TaxID: 1680908
Cluster
View cluster (69 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-58_129-198
Domain cluster:
rep: IMGVR_UViG_3300014028_000116-3300014028-Ga0117810_100144812__D1-30_85-157
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13476.13 best | AAA_23 | 29.1 | 2.10e-06 | 98.0% | 42.3% |
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wsiB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 74.0 | 5.72e-01 | 97.0% | 87.1% |
| 6wctD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 73.0 | 6.31e-01 | 96.0% | 81.6% |
| 1kgdA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.81 | 72.0 | 6.84e-01 | 94.9% | 94.8% |
| 3hr7B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 69.0 | 5.83e-01 | 91.9% | 97.4% |
| 2yogA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 71.0 | 5.58e-01 | 96.0% | 90.9% |
| 2pt5B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 73.0 | 5.99e-01 | 98.0% | 98.8% |
| 3hdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.79 | 71.0 | 5.82e-01 | 96.0% | 96.4% |
| 3tauA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 70.0 | 6.28e-01 | 96.0% | 85.0% |
| 3ld9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 68.0 | 5.43e-01 | 92.9% | 96.8% |
| 4loaA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 68.0 | 5.73e-01 | 92.9% | 96.2% |
| 8dv0A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 69.0 | 5.49e-01 | 96.0% | 99.5% |
| 4ttrA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 67.0 | 5.27e-01 | 96.0% | 95.0% |
| 3v9pB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 62.0 | 4.87e-01 | 93.9% | 97.0% |
| 2q5cA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 57.0 | 5.77e-01 | 96.0% | 91.8% |
| 2vycA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 60.0 | 5.36e-01 | 97.0% | 96.4% |
| 2rjnA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 59.0 | 5.35e-01 | 96.0% | 88.1% |
| 2pjuC01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 58.0 | 5.80e-01 | 96.0% | 93.0% |
| 1a04A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 61.0 | 5.64e-01 | 99.0% | 96.0% |
| 1geqB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 47.0 | 3.49e-01 | 72.7% | 85.3% |
| 4d6yA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 57.0 | 5.36e-01 | 94.9% | 98.3% |
| 2qxyA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 56.0 | 5.29e-01 | 92.9% | 95.8% |
| 3cg4A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 57.0 | 5.30e-01 | 96.0% | 95.2% |
| 3lufB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 56.0 | 5.23e-01 | 96.0% | 96.0% |
| 2b4aA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 56.0 | 5.34e-01 | 94.9% | 95.7% |
| 2gkgA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 56.0 | 5.27e-01 | 96.0% | 95.9% |
| 2rdmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 55.0 | 5.17e-01 | 96.0% | 94.4% |
| 1to6A01 | 3.40.50.10350 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycerate kinase; domain 1 | 0.64 | 57.0 | 5.07e-01 | 99.0% | 97.9% |
| 1y1lA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 55.0 | 5.10e-01 | 93.9% | 98.4% |
| 3lteD00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 56.0 | 5.26e-01 | 98.0% | 93.5% |
| 5tebG00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.64 | 54.0 | 4.67e-01 | 94.9% | 97.5% |
| 6ejiA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.64 | 54.0 | 4.48e-01 | 96.0% | 98.9% |
| 3gt7A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 54.0 | 4.96e-01 | 96.0% | 90.9% |
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 54.0 | 5.00e-01 | 94.9% | 93.0% |
| 3t38A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 55.0 | 5.08e-01 | 96.0% | 94.5% |
| 1p2fA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 5.07e-01 | 94.9% | 95.8% |
| 7pvaB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 55.0 | 5.20e-01 | 97.0% | 98.3% |
| 3s3tA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 45.0 | 4.02e-01 | 75.8% | 95.2% |
| 3kcnB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 4.86e-01 | 96.0% | 86.9% |
| 2jk1A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 4.84e-01 | 96.0% | 85.5% |
| 3hdvB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 55.0 | 5.07e-01 | 97.0% | 92.9% |
| 3eqzB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 54.0 | 5.05e-01 | 96.0% | 96.0% |
| 1reqB02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.62 | 54.0 | 4.93e-01 | 100.0% | 89.9% |
| 5tqjA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 54.0 | 5.09e-01 | 100.0% | 96.8% |
| 3jteA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 52.0 | 4.89e-01 | 96.0% | 95.2% |
| 3ouzA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 43.0 | 4.52e-01 | 92.9% | 81.8% |
| 5irmC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 44.0 | 3.46e-01 | 76.8% | 69.1% |
| 1tb3E00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 42.0 | 2.99e-01 | 72.7% | 62.3% |
| 3u80A00 | 3.40.50.9100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II | 0.61 | 52.0 | 4.82e-01 | 96.0% | 96.9% |
| 3slrA02 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 51.0 | 4.43e-01 | 94.9% | 95.6% |
| 1eiwA00 | 3.40.50.9200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein MTH538 | 0.60 | 52.0 | 5.05e-01 | 96.0% | 91.9% |
| 1iz0A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 44.0 | 3.85e-01 | 83.8% | 80.5% |
| 5mmjb01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.54 | 45.0 | 4.09e-01 | 96.0% | 66.0% |
| 3thoB01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.54 | 44.0 | 3.39e-01 | 91.9% | 93.7% |
| 2hwyA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.54 | 42.0 | 4.02e-01 | 84.8% | 97.4% |
| 3htvA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 43.0 | 3.65e-01 | 87.9% | 83.3% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5050242 | 2004.1.1.50 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin | 0.81 | 73.0 | 5.73e-01 | 96.0% | 91.8% |
| 389395 | 2004.1.1.79 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin | 0.79 | 70.0 | 5.39e-01 | 94.9% | 88.7% |
| 3170282 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.79 | 71.0 | 6.09e-01 | 96.0% | 98.0% |
| 4988052 | 2007.2.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like | 0.73 | 57.0 | 5.77e-01 | 96.0% | 82.0% |
| 3604204 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 62.0 | 5.03e-01 | 94.9% | 95.0% |
| 4027430 | 7522.1.1.5 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C_1 | 0.70 | 60.0 | 5.40e-01 | 93.9% | 84.4% |
| 3878911 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.69 | 59.0 | 4.87e-01 | 93.9% | 96.6% |
| 3599558 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.68 | 59.0 | 5.44e-01 | 96.0% | 83.8% |
| 3535233 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.68 | 58.0 | 5.42e-01 | 94.9% | 95.2% |
| 3838052 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.67 | 61.0 | 5.61e-01 | 99.0% | 94.4% |
| 4936577 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.67 | 59.0 | 5.30e-01 | 96.0% | 91.9% |
| 4305337 | 7512.1.1.117 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28, Glyco_tran_28_C | 0.67 | 57.0 | 3.84e-01 | 92.9% | 98.9% |
| 4959427 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.67 | 55.0 | 5.30e-01 | 89.9% | 95.7% |
| 3703402 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.67 | 59.0 | 5.18e-01 | 97.0% | 77.9% |
| 4286843 | 7512.1.1.10 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28 | 0.67 | 56.0 | 4.48e-01 | 92.9% | 98.0% |
| 3973498 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.67 | 59.0 | 5.59e-01 | 96.0% | 92.2% |
| 5062615 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.66 | 59.0 | 5.14e-01 | 99.0% | 89.3% |
| 4163006 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.66 | 58.0 | 5.54e-01 | 96.0% | 92.2% |
| 3855778 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.66 | 59.0 | 5.20e-01 | 99.0% | 91.0% |
| 4255891 | 2007.6.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS_2 | 0.66 | 58.0 | 4.64e-01 | 97.0% | 74.4% |
| 3251323 | 2004.1.1.561 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TRAPPC9-Trs120 | 0.66 | 57.0 | 4.88e-01 | 96.0% | 95.6% |
| 3712654 | 7526.1.1.0 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 | 0.66 | 55.0 | 5.47e-01 | 93.9% | 91.4% |
| 3972637 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.65 | 57.0 | 5.20e-01 | 96.0% | 93.1% |
| 4682251 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.65 | 55.0 | 3.66e-01 | 93.9% | 27.9% |
| 5062908 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.65 | 55.0 | 4.50e-01 | 93.9% | 98.4% |
| 10043 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.65 | 56.0 | 5.34e-01 | 94.9% | 95.7% |
| 1822144 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.65 | 57.0 | 5.18e-01 | 99.0% | 88.2% |
| 5017901 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.64 | 56.0 | 5.15e-01 | 94.9% | 90.4% |
| 5075485 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.64 | 54.0 | 4.87e-01 | 93.9% | 82.9% |
| 3258501 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.64 | 55.0 | 4.84e-01 | 94.9% | 76.6% |
| 4932019 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.64 | 55.0 | 4.77e-01 | 96.0% | 75.5% |
| 4547621 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.64 | 56.0 | 4.62e-01 | 97.0% | 71.4% |
| 3604315 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.63 | 51.0 | 4.16e-01 | 89.9% | 77.0% |
| 5061381 | 7563.1.1.2 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › Lysine_decarbox | 0.63 | 54.0 | 4.36e-01 | 98.0% | 90.2% |
| 3451400 | 2007.1.3.33 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Receiver_CRE1 | 0.62 | 56.0 | 4.73e-01 | 100.0% | 81.8% |
| None | — | 0.62 | 45.0 | 3.50e-01 | 77.8% | 63.4% | |
| 4985423 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.61 | 51.0 | 4.77e-01 | 96.0% | 89.2% |
| 3254147 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.60 | 51.0 | 4.54e-01 | 96.0% | 94.7% |
| 4128742 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.60 | 48.0 | 3.78e-01 | 85.9% | 69.0% |
| 3975609 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.60 | 51.0 | 5.09e-01 | 93.9% | 93.0% |
| 4964836 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.59 | 52.0 | 4.43e-01 | 100.0% | 95.9% |
| 5040919 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.58 | 44.0 | 3.94e-01 | 80.8% | 76.4% |
| 3615725 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.57 | 42.0 | 3.24e-01 | 77.8% | 95.7% |
| 4956932 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.57 | 47.0 | 3.54e-01 | 91.9% | 92.9% |
| 4142697 | 2002.1.1.9 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase | 0.56 | 43.0 | 3.32e-01 | 84.8% | 97.1% |
| 4927949 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.56 | 44.0 | 3.36e-01 | 85.9% | 99.6% |
| 4995754 | 7563.1.1.0 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related | 0.56 | 40.0 | 3.67e-01 | 77.8% | 91.4% |
| 3904073 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.55 | 41.0 | 3.56e-01 | 78.8% | 78.1% |
D2
medium
residues 59-128
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.68 | 42.0 | 3.34e-01 | 74.3% | 30.6% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 43.0 | 3.99e-01 | 74.3% | 90.0% |
| 6f1eA01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 45.0 | 3.69e-01 | 94.3% | 43.2% |
| 7eebI01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 41.0 | 3.13e-01 | 74.3% | 45.0% |
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.52 | 34.0 | 3.12e-01 | 71.4% | 49.0% |
| 3hl0A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.51 | 42.0 | 3.23e-01 | 98.6% | 79.1% |
| 2bnmA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 36.0 | 3.55e-01 | 75.7% | 98.6% |
| 5mmjo00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.50 | 38.0 | 3.78e-01 | 82.9% | 77.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3372157 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.62 | 41.0 | 3.85e-01 | 84.3% | 55.3% |
| 3601831 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 40.0 | 3.95e-01 | 77.1% | 81.3% |