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deoxyribonuclease
Euk-VirEquid_gammaherpesvirus_2
deoxyribonuclease__NP_042634__Equid_gammaherpesvirus_2__12657
Identity
- Accession:
- NP_042634 ↗
- Protein ID:
- deoxyribonuclease
- Kingdom:
- euk
Quality
87.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Percavirus›
Equid_gammaherpesvirus_2
TaxID: 12657
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-84_122-169
Domain cluster:
rep: deoxyribonuclease__YP_009551847__Rhinolophus_gammaherpesvirus_1__2054179__D9-136
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01771.24 best | Viral_alk_exo | 107.4 | 1.10e-30 | 85.6% | 26.5% |
D2
medium
residues 170-198_222-261_471-509
Domain cluster:
rep: Exonuclease__YP_214099__Murid_betaherpesvirus_1__10366__D221-282_429-473_511-556
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01771.24 best | Viral_alk_exo | 48.7 | 6.90e-13 | 41.7% | 8.7% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qr4A02 | 1.10.287.830 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › putative peptidase helix hairpin domain like | 0.50 | 21.0 | 3.16e-01 | 79.6% | 91.5% |
D3
medium
residues 199-221_262-279_362-470
Domain cluster:
rep: Exonuclease__YP_214099__Murid_betaherpesvirus_1__10366__D221-282_429-473_511-556
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01771.24 best | Viral_alk_exo | 163.4 | 1.10e-47 | 74.7% | 24.5% |
| PF01771.24 | Viral_alk_exo | 20.7 | 2.20e-04 | 17.3% | 5.4% |