deoxyribonuclease

Euk-Vir

Aotine_betaherpesvirus_1

deoxyribonuclease__YP_004940114__Aotine_betaherpesvirus_1__50290

Identity

87.3 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Aotine_betaherpesvirus_1

TaxID: 50290

View cluster (76 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-149

PDB

Domain cluster: rep: GP98__YP_007417864__Caviid_betaherpesvirus_2__33706__D55-187

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	50.4	2.10e-13	96.6%	24.5%

D2 medium residues 153-180_497-536

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2bjfA01	3.60.60.10	Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A	0.60	49.0	3.19e-01	91.2%	24.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3901054	197.1.1.1 ↗	alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M	0.58	40.0	3.12e-01	72.1%	61.4%

D3 medium residues 181-256_344-357_394-461

PDB

Domain cluster: rep: Exonuclease__YP_214099__Murid_betaherpesvirus_1__10366__D221-282_429-473_511-556

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	72.2	5.20e-20	52.5%	15.8%
PF01771.24	Viral_alk_exo	83.8	1.50e-23	48.7%	16.5%

D4 medium residues 257-343_462-496

PDB

Domain cluster: rep: BGLF5__YP_010087479__Phascolarctid_gammaherpesvirus_1__2249313__D240-334_400-410

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	65.3	6.30e-18	73.8%	20.0%