deoxyribonuclease

Euk-Vir

Elephantid_betaherpesvirus_1

deoxyribonuclease__YP_007969777__Elephantid_betaherpesvirus_1__146015

Identity

88.0 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Proboscivirus› Elephantid_betaherpesvirus_1

TaxID: 146015

View cluster (76 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 13-164_444-473

PDB

Domain cluster: rep: deoxyribonuclease__YP_009051981__Elephant_endotheliotropic_herpesvirus_5__768738__D21-169_459-476

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	30.4	2.50e-07	74.2%	19.7%

D2 medium residues 165-248_350-443

PDB

Domain cluster: rep: deoxyribonuclease__YP_443858__Papiine_alphaherpesvirus_2__340907__D355-603

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	77.4	1.40e-21	55.1%	20.2%
PF01771.24	Viral_alk_exo	75.4	5.50e-21	44.9%	17.1%

D3 medium residues 249-349

PDB

Domain cluster: rep: BGLF5__YP_010087479__Phascolarctid_gammaherpesvirus_1__2249313__D240-334_400-410

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	46.1	4.20e-12	94.1%	18.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
182718	2008.1.1.2 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Viral_alk_exo	0.81	76.0	4.82e-01	100.0%	23.8%
4632256	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.61	28.0	3.17e-01	98.0%	56.0%
3240521	109.4.1.1231 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_NAA35	0.52	38.0	2.71e-01	79.2%	83.6%