deoxyribonuclease

Euk-Vir

Human_alphaherpesvirus_2

deoxyribonuclease__YP_009137163__Human_alphaherpesvirus_2__10310

Identity

71.1 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Human_alphaherpesvirus_2

TaxID: 10310

View cluster (76 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 129-252

PDB

Domain cluster: rep: deoxyribonuclease__YP_009230142__Leporid_alphaherpesvirus_4__481315__D113-231

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	60.4	1.90e-16	96.0%	14.1%

D2 medium residues 316-348_482-515_571-596

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	40.0	3.00e-10	63.4%	8.0%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ox3A00	1.20.5.320	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 6-Phosphogluconate Dehydrogenase, domain 3	0.51	32.0	3.01e-01	95.7%	54.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3593659	59.1.1.0 ↗	beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like	0.50	30.0	2.32e-01	100.0%	28.7%

D3 medium residues 349-481_516-570

PDB

Domain cluster: rep: deoxyribonuclease__YP_443858__Papiine_alphaherpesvirus_2__340907__D355-603

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	128.7	3.60e-37	74.5%	28.2%