deoxyribonuclease

Euk-Vir

Ateline_alphaherpesvirus_1

deoxyribonuclease__YP_009361926__Ateline_alphaherpesvirus_1__35243

Identity

74.2 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Ateline_alphaherpesvirus_1

TaxID: 35243

View cluster (76 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 128-240_593-604

PDB

Domain cluster: rep: deoxyribonuclease__YP_009230142__Leporid_alphaherpesvirus_4__481315__D113-231

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	28.0	1.30e-06	71.2%	7.8%

D2 medium residues 272-292_324-369_513-529

PDB

Domain cluster: rep: deoxyribonuclease__YP_009342394__Spheniscid_alphaherpesvirus_1__2560777__D200-223_243-297_421-453

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	52.5	4.90e-14	86.9%	16.5%

D3 medium residues 409-512

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	71.0	1.20e-19	100.0%	21.5%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3zqmA00	6.10.140.2160	Special › Helix non-globular › Helix Hairpins ›	0.59	21.0	2.80e-01	91.3%	57.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
182718	2008.1.1.2 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Viral_alk_exo	0.89	80.0	5.09e-01	100.0%	22.2%

D4 medium residues 530-592

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01771.24 best	Viral_alk_exo	21.7	1.00e-04	66.7%	6.1%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3518393	11.1.4.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like	0.53	37.0	2.89e-01	73.0%	91.3%