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disulfide_oxidoreductase

Euk-Vir

Pithovirus_sibericum

disulfide_oxidoreductase__YP_009001368__Pithovirus_sibericum__1450746

Identity

Accession:
YP_009001368 ↗
Protein ID:
disulfide_oxidoreductase
Kingdom:
euk

Quality

69.5 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Pithoviridae› Alphapithovirus› Pithovirus_sibericum

TaxID: 1450746

Cluster

View cluster (24 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-155
PDB
Domain cluster: rep: Ervl-Alr_family_protein__YP_009342175__Lymphocystis_disease_virus_Sa__1898060__D32-125
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04777.19 best Evr1_Alr 52.2 9.10e-14 96.1% 93.5%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gwlA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.85 79.0 7.84e-01 100.0% 94.3%
1oqcA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.85 76.0 7.38e-01 100.0% 86.6%
1jr8A00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.85 75.0 7.54e-01 100.0% 92.4%
3llkA01 1.20.120.1960 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain 0.67 53.0 5.40e-01 90.3% 87.8%
1j8yF01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.67 52.0 5.58e-01 87.4% 100.0%
2qupA00 1.20.120.490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain 0.66 53.0 5.08e-01 86.4% 86.6%
2qkwB02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.66 50.0 4.01e-01 80.6% 92.0%
1yjgA00 1.20.120.240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 0.63 51.0 4.45e-01 88.3% 94.9%
1cpqA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.61 49.0 4.62e-01 88.3% 94.6%
3l39A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.60 49.0 3.93e-01 87.4% 91.0%
2hytA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 47.0 3.91e-01 88.3% 59.6%
5tkyA05 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.57 36.0 3.90e-01 70.9% 74.7%
2e9fB01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.57 41.0 4.23e-01 73.8% 82.3%
2pywA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.57 42.0 3.08e-01 77.7% 98.3%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 36.0 3.24e-01 96.1% 44.3%
1or7B01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.56 40.0 4.20e-01 73.8% 94.7%
1yowA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.55 46.0 3.62e-01 93.2% 76.5%
3rk6A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 39.0 3.07e-01 74.8% 37.8%
3w6bB00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.54 41.0 3.62e-01 81.6% 74.5%
2lseA00 1.20.120.1360 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.54 42.0 4.27e-01 82.5% 88.1%
2hfiA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.53 42.0 4.00e-01 86.4% 95.1%
4p9fA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.52 42.0 3.79e-01 87.4% 66.7%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.52 36.0 3.99e-01 71.8% 89.2%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.51 30.0 3.12e-01 88.3% 61.0%
3a98A02 1.20.1270.350 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain 0.51 38.0 4.06e-01 83.5% 94.3%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 37.0 3.79e-01 77.7% 90.0%
6gwuD00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.51 45.0 3.63e-01 100.0% 72.3%
2c61A00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 43.0 2.96e-01 100.0% 45.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3211559 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.88 79.0 7.07e-01 100.0% 70.3%
3345939 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.86 77.0 7.28e-01 100.0% 80.8%
3172977 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.85 76.0 6.96e-01 100.0% 74.6%
135564 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.85 79.0 7.84e-01 100.0% 94.3%
54687 601.21.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase 0.85 76.0 7.35e-01 100.0% 86.6%
54681 601.21.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase 0.85 75.0 7.52e-01 100.0% 92.4%
3596726 601.21.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase 0.85 77.0 7.39e-01 100.0% 86.1%
3697926 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.84 76.0 6.46e-01 100.0% 62.7%
3740234 109.46.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH 0.61 49.0 4.57e-01 87.4% 99.2%
3179721 109.46.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH 0.59 50.0 3.95e-01 91.3% 63.3%
4420204 1037.1.1.1 ↗ alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT 0.59 52.0 3.93e-01 99.0% 68.7%
3562699 3736.1.1.0 ↗ alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 0.59 38.0 3.61e-01 100.0% 54.2%
4196844 109.46.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH 0.57 45.0 3.83e-01 85.4% 70.3%
4983734 3646.1.1.1 ↗ alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ 0.57 46.0 3.52e-01 88.3% 46.4%
3874682 109.46.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH 0.56 47.0 4.30e-01 91.3% 97.0%
3272472 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 46.0 3.29e-01 95.1% 40.0%
4313333 109.46.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) › CTLH 0.55 47.0 3.62e-01 94.2% 58.3%
3736716 109.4.1.441 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TFCD_C 0.55 40.0 3.48e-01 100.0% 47.1%
3166681 101.1.10.22 ↗ alpha arrays › HTH › HTH › Cyclin-like › ORC6 0.52 37.0 3.75e-01 76.7% 81.9%
3740824 101.1.10.22 ↗ alpha arrays › HTH › HTH › Cyclin-like › ORC6 0.51 35.0 3.61e-01 94.2% 74.7%
3742230 109.4.1.167 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rif1_N 0.51 38.0 2.60e-01 81.6% 37.5%
3925720 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.51 44.0 3.35e-01 100.0% 73.2%
3689499 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 45.0 3.38e-01 100.0% 86.5%
4928682 5060.2.1.0 ↗ alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain 0.51 41.0 3.88e-01 89.3% 85.6%