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divergent_serine_threonine_protein_kinase
Euk-VirMarseillevirus_marseillevirus
divergent_serine_threonine_protein_kinase__YP_003407088__Marseillevirus_marseillevirus__694581
Identity
- Accession:
- YP_003407088 ↗
- Protein ID:
- divergent_serine_threonine_protein_kinase
- Kingdom:
- euk
Quality
93.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Marseillevirus_marseillevirus
TaxID: 694581
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-104
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zy9A03 | 2.60.40.2760 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 21.0 | 3.17e-01 | 99.0% | 74.4% |
| 2z4tA01 | 2.60.40.3010 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 35.0 | 3.65e-01 | 100.0% | 64.1% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 36.0 | 3.75e-01 | 100.0% | 65.3% |
| 2j3tC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 30.0 | 2.72e-01 | 78.4% | 38.3% |
| 4jvyB00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.52 | 38.0 | 3.18e-01 | 77.5% | 92.1% |
| 3mcsA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 38.0 | 3.11e-01 | 81.4% | 89.8% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.51 | 29.0 | 3.41e-01 | 98.0% | 78.9% |
| 5df7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 36.0 | 2.58e-01 | 75.5% | 98.0% |
| 2rb7A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 35.0 | 3.48e-01 | 91.2% | 68.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3483574 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 40.0 | 2.47e-01 | 100.0% | 10.7% |
| 3718648 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 31.0 | 3.12e-01 | 82.4% | 46.3% |
| 4258307 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 41.0 | 3.04e-01 | 81.4% | 35.4% |
| 3586304 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.54 | 47.0 | 4.30e-01 | 93.1% | 78.5% |
| 3250477 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 27.0 | 2.62e-01 | 83.3% | 38.7% |
| 4000363 | 223.1.1.119 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Intu_longin_2 | 0.52 | 38.0 | 3.21e-01 | 75.5% | 95.3% |
| 4514948 | 1.1.8.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB | 0.52 | 32.0 | 3.39e-01 | 100.0% | 67.4% |
| 3252861 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.51 | 30.0 | 2.41e-01 | 94.1% | 26.5% |
| 4227550 | 3008.1.1.2 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DUF5915 | 0.51 | 40.0 | 4.24e-01 | 85.3% | 95.5% |
D2
high
residues 113-196
Domain cluster:
rep: putative_serine_threonine_protein_kinase__YP_004347321__Lausannevirus__999883__D112-194
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01636.30 best | APH | 24.8 | 2.40e-05 | 90.5% | 21.8% |