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dna_ligase

Euk-Vir

Clostera_anastomosis_granulovirus_Henan

dna_ligase__YP_008720052__Clostera_anastomosis_granulovirus_Henan__1986291

Identity

Accession:
YP_008720052 ↗
Protein ID:
dna_ligase
Kingdom:
euk

Quality

76.6 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Clostera_anastomosis_granulovirus_Henan

TaxID: 1986291

Cluster

View cluster (36 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-173
PDB
Domain cluster: rep: DNA_ligase__YP_009329768__BeAn_58058_virus__67082__D5-155
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04675.20 best DNA_ligase_A_N 35.2 2.00e-08 93.6% 90.2%
D2 high residues 207-376
PDB
Domain cluster: rep: Salt_Pond_R1_B_H2O_MG_scaffold_1_prodigal-single.1__X__X__00295__D161-347
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF09414.16 best RNA_ligase 30.2 6.60e-07 92.3% 97.7%
PF01068.27 DNA_ligase_A_M 59.0 7.30e-16 56.5% 43.6%
PF01068.27 DNA_ligase_A_M 45.5 1.10e-11 46.5% 38.7%
D3 high residues 381-542
PDB
Domain cluster: rep: DNA_ligase_-2-__YP_010377156__Monkeypox_virus__10244__D413-557