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dnapol

Euk-Vir

Clostera_anastomosis_granulovirus_Henan

dnapol__YP_008720044__Clostera_anastomosis_granulovirus_Henan__1986291

Identity

Accession:
YP_008720044 ↗
Protein ID:
dnapol
Kingdom:
euk

Quality

84.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Clostera_anastomosis_granulovirus_Henan

TaxID: 1986291

Cluster

View cluster (158 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-199
PDB
Domain cluster: rep: DNA_polymerase__YP_010084862__Shrimp_hemocyte_iridescent_virus__2039780__D2-200
D2 medium residues 202-294
PDB
Domain cluster: rep: DNA_polymerase_elongation_subunit_family_B__YP_010088005__Lymphocystis_disease_virus_4__2704413__D159-241
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03104.26 best DNA_pol_B_exo1 39.6 5.60e-10 100.0% 38.8%
D3 medium residues 428-490_596-653
PDB
Domain cluster: rep: IMGVR_UViG_3300048031_000811-3300048031-Ga0494182_008429_2395_4416__D190-244_288-384
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00136.27 best DNA_pol_B 38.9 7.00e-10 76.9% 12.6%
D4 medium residues 516-545_574-595_654-668
PDB
Domain cluster: rep: DNA_polymerase__YP_009316112__Anticarsia_gemmatalis_multiple_nucleopolyhedrovirus__268591__D473-499_523-556
D5 medium residues 546-573_669-786
PDB
Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_009552191__Malacosoma_neustria_nucleopolyhedrovirus__38012__D557-567_668-765
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00136.27 best DNA_pol_B 25.4 8.70e-06 80.8% 18.3%
D6 medium residues 787-831_901-1036
PDB
Domain cluster: rep: DNA_pol__YP_009011170__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219__D790-807_882-1000
D7 medium residues 832-900
PDB
Domain cluster: rep: DNA_pol__YP_009011170__Mamestra_brassicae_multiple_nucleopolyhedrovirus__78219__D808-832_847-881