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dnapol

Euk-Vir

Lambdina_fiscellaria_nucleopolyhedrovirus

dnapol__YP_009133279__Lambdina_fiscellaria_nucleopolyhedrovirus__1642929

Identity

Accession:
YP_009133279 ↗
Protein ID:
dnapol
Kingdom:
euk

Quality

78.2 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Lambdina_fiscellaria_nucleopolyhedrovirus

TaxID: 1642929

Cluster

View cluster (158 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-75_120-190
PDB
Domain cluster: rep: DNA_polymerase__YP_009666761__Mythimna_unipuncta_nucleopolyhedrovirus__447897__D1-67_114-188
D2 medium residues 4-24_193-246_268-323
PDB
Domain cluster: rep: DNA_polymerase_catalytic_subunit__YP_401712__Human_gammaherpesvirus_4__10376__D288-457
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03104.26 best DNA_pol_B_exo1 73.4 2.70e-20 99.2% 53.3%
D3 medium residues 542-704
PDB
Domain cluster: rep: DNA_polymerase__YP_010086932__Cryptophlebia_peltastica_nucleopolyhedrovirus__2304025__D494-537_560-649
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00136.27 best DNA_pol_B 71.1 1.20e-19 96.3% 33.6%
D4 medium residues 911-969
PDB