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e25.2

Euk-Vir

Murid_betaherpesvirus_8

e25.2__YP_007016430__Murid_betaherpesvirus_8__1261657

Identity

Accession:
YP_007016430 ↗
Protein ID:
e25.2
Kingdom:
euk

Quality

82.8 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Muromegalovirus› Murid_betaherpesvirus_8

TaxID: 1261657

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-171
PDB
Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
D2 high residues 180-313
PDB
Domain cluster: rep: US22_family_homolog__YP_214055__Murid_betaherpesvirus_1__10366__D433-537
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02393.22 best US22 40.4 4.00e-10 83.6% 62.9%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.64 25.0 3.71e-01 76.9% 82.5%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 38.0 4.25e-01 89.6% 87.4%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.56 38.0 4.20e-01 84.3% 89.4%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.55 35.0 3.58e-01 79.9% 65.1%
6p2lA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 3.38e-01 91.8% 96.0%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.55 30.0 3.33e-01 71.6% 64.5%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 44.0 4.40e-01 86.6% 82.3%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 27.0 3.51e-01 76.1% 93.7%
1gofA02 2.130.10.80 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Galactose oxidase/kelch, beta-propeller 0.53 45.0 3.27e-01 92.5% 81.4%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.53 36.0 3.31e-01 86.6% 52.0%
7sulB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 3.32e-01 91.0% 85.5%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 43.0 3.19e-01 90.3% 98.9%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 43.0 3.32e-01 91.8% 92.7%
5h1kB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 3.15e-01 87.3% 94.9%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 42.0 3.13e-01 88.8% 96.7%
1ijqA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 41.0 3.34e-01 88.1% 90.6%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 30.0 2.77e-01 70.1% 42.9%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3436651 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.57 44.0 3.25e-01 81.3% 99.7%
3594793 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 41.0 3.10e-01 76.9% 61.6%
3270014 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.55 44.0 3.10e-01 85.1% 66.0%
3484105 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.55 41.0 4.03e-01 79.9% 94.7%
1156978 3735.1.1.2 ↗ beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › SpvB,TcdB_toxin_midC,TcdB_toxin_midN 0.55 48.0 3.55e-01 98.5% 47.9%
3399544 5.1.3.25 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.53 42.0 3.25e-01 83.6% 75.3%
2439577 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.53 40.0 4.26e-01 81.3% 89.9%
3511200 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.52 33.0 4.02e-01 80.6% 100.0%
3784210 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 43.0 3.16e-01 91.0% 74.2%
3597338 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 39.0 3.47e-01 81.3% 82.4%
3688468 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 43.0 3.32e-01 91.8% 83.5%
3429037 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.51 40.0 3.03e-01 83.6% 92.9%
3923688 5.1.4.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.51 45.0 3.24e-01 100.0% 95.2%
3873021 5.1.5.4 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.50 41.0 2.83e-01 88.8% 67.3%
3440815 5.1.11.35 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_AT5G49610-like 0.50 41.0 3.10e-01 88.8% 47.4%
3591111 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 42.0 2.94e-01 91.8% 84.3%
3424085 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.50 40.0 3.05e-01 86.6% 82.6%
4944332 2011.2.1.7 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 0.50 37.0 3.09e-01 77.6% 81.7%