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early_protein_L1
Euk-VirSaimiri_sciureus_papillomavirus_1
early_protein_L1__YP_009002602__Saimiri_sciureus_papillomavirus_1__990304
Identity
- Accession:
- YP_009002602 ↗
- Protein ID:
- early_protein_L1
- Kingdom:
- euk
Quality
84.3
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Papovaviricetes›
Zurhausenvirales›
Papillomaviridae›
Dyoomikronpapillomavirus›
Saimiri_sciureus_papillomavirus_1
TaxID: 990304
Cluster
View cluster (154 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 116-230_253-267_282-297
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 172.3 | 2.50e-50 | 79.5% | 22.9% |
D2
medium
residues 69-112_231-252_300-388_451-474
Domain cluster:
rep: late_protein_L1__NP_077122__Alphapapillomavirus_4__337043__D129-185_198-277_298-367
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00500.25 best | Late_protein_L1 | 147.7 | 7.40e-43 | 51.4% | 18.3% |
| PF00500.25 | Late_protein_L1 | 71.3 | 1.10e-19 | 24.6% | 8.8% |