encapsidation_protein_52K

Euk-Vir

Pigeon_adenovirus_1

encapsidation_protein_52K__YP_009047096__Pigeon_adenovirus_1__764030

Identity

71.7 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Aviadenovirus› Pigeon_adenovirus_1

TaxID: 764030

View cluster (10 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 89-177

PDB

Domain cluster: rep: 52K__YP_009162349__Equine_adenovirus_2__67603__D61-138

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03052.21 best	Adeno_52K	85.2	6.20e-24	100.0%	39.3%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2o8iA00	1.10.3330.10	Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	0.53	38.0	3.25e-01	77.5%	96.1%
5z5mA01	1.10.3330.10	Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	0.52	37.0	3.24e-01	77.5%	91.3%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4964854	633.13.1.1 ↗	alpha bundles › Bromodomain-like › DsbB-like › DsbB-like › DsbB	0.54	41.0	3.50e-01	79.8%	90.9%

D2 high residues 195-356

PDB

Domain cluster: rep: encapsidation_protein_52K__YP_009505657__Fowl_aviadenovirus_6__172862__D198-348

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03052.21 best	Adeno_52K	93.5	1.70e-26	51.8%	41.8%