←Back to structures

endonuclease

Euk-Vir

Noumeavirus

endonuclease__YP_009345538__Noumeavirus__1955558

Identity

Accession:
YP_009345538 ↗
Protein ID:
endonuclease
Kingdom:
euk

Quality

85.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Marseilleviridae› Marseillevirus› Noumeavirus

TaxID: 1955558

Cluster

View cluster (37 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-72
PDB
Domain cluster: rep: restriction_endonuclease__YP_009345354__Noumeavirus__1955558__D260-319
D2 high residues 243-302
PDB
Domain cluster: rep: restriction_endonuclease__YP_009345354__Noumeavirus__1955558__D260-319
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14311.13 best DUF4379 26.7 7.20e-06 88.3% 87.5%
D3 high residues 304-425
PDB
Domain cluster: rep: LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00294__D106-220
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04480.19 best DUF559 25.0 2.00e-05 90.2% 47.7%
D4 medium residues 100-224
PDB
Domain cluster: rep: putative_restriction_endonuclease__YP_004347215__Lausannevirus__999883__D6-99
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF14311.13 best DUF4379 39.8 5.90e-10 43.2% 96.4%
PF14311.13 DUF4379 30.7 4.20e-07 36.0% 75.0%