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endopeptidase
Euk-VirFusarium_graminearum_mycotymovirus_1
endopeptidase__YP_009553721__Fusarium_graminearum_mycotymovirus_1__1809243
Identity
- Accession:
- YP_009553721 ↗
- Protein ID:
- endopeptidase
- Kingdom:
- euk
Quality
73.0
mean pLDDT
Taxonomy
TaxID: 1809243
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-99
Domain cluster:
rep: Carlavirus_endopeptidase__YP_001086452_Carlavirus_endopeptidase__Chrysanthemum_virus_B__12165__D3-86
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05381.19 best | Peptidase_C21 | 36.8 | 6.00e-09 | 78.1% | 52.2% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5lw5A00 | 3.90.70.100 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Tymovirus endopeptidases | 0.89 | 80.0 | 6.78e-01 | 100.0% | 62.1% |
| 7pl7A01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.76 | 71.0 | 5.98e-01 | 100.0% | 79.6% |
| 4bouA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.76 | 71.0 | 6.12e-01 | 100.0% | 78.0% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.74 | 69.0 | 5.87e-01 | 100.0% | 76.0% |
| 4boqA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.74 | 69.0 | 5.56e-01 | 100.0% | 63.4% |
| 6w9rB01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.73 | 68.0 | 5.67e-01 | 100.0% | 89.3% |
| 4fw9A03 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.59 | 47.0 | 3.53e-01 | 86.5% | 64.0% |
| 4zy7A00 | 3.30.1050.40 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › | 0.53 | 38.0 | 3.61e-01 | 76.0% | 84.0% |
| 2gzaB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 41.0 | 3.29e-01 | 86.5% | 89.2% |
| 1epuA04 | 3.40.50.1910 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 2 | 0.52 | 41.0 | 3.49e-01 | 88.5% | 86.2% |
| 1rm6D04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.51 | 41.0 | 3.22e-01 | 92.7% | 91.5% |
| 3e8sA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 39.0 | 3.07e-01 | 84.4% | 79.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4881140 | 219.1.1.29 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C21 | 0.89 | 79.0 | 6.75e-01 | 100.0% | 62.1% |
| 2770413 | 219.1.1.29 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C21 | 0.88 | 73.0 | 6.21e-01 | 96.9% | 57.1% |
| 3699179 | 219.1.1.48 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 | 0.78 | 72.0 | 5.29e-01 | 100.0% | 76.2% |
| 3804954 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.78 | 70.0 | 6.96e-01 | 100.0% | 92.0% |
| 3763030 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.75 | 70.0 | 5.37e-01 | 100.0% | 53.7% |
| 3993036 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.75 | 70.0 | 6.17e-01 | 100.0% | 80.0% |
| 3994770 | 219.1.1.15 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU | 0.74 | 67.0 | 6.18e-01 | 97.9% | 93.3% |
| 4012196 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 67.0 | 4.83e-01 | 100.0% | 76.7% |
| 3928738 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 56.0 | 5.31e-01 | 100.0% | 92.2% |
| 5079039 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.62 | 38.0 | 2.98e-01 | 97.9% | 28.1% |
| 4939666 | 4143.1.1.1 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › THUMP | 0.54 | 40.0 | 4.23e-01 | 97.9% | 90.6% |
| 5011455 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.51 | 35.0 | 3.75e-01 | 100.0% | 86.3% |
| 3947685 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.50 | 41.0 | 3.14e-01 | 89.6% | 80.9% |